Gene Information

Name : LBFF_1920 (LBFF_1920)
Accession : YP_007996093.1
Strain : Lactobacillus fermentum F-6
Genome accession: NC_021235
Putative virulence/resistance : Unknown
Product : Fucose transport protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1940824 - 1942152 bp
Length : 1329 bp
Strand : -
Note : -

DNA sequence :
ATGGATAACTTAAAGAAGCAGTCGTGGGTTCAATATGACGACGGCTACCTCAGCAAGACGCCGGTTTGGCAATACATTTT
AGTTTCGTTGATCTTCCCAATGTGGGGGATGGCAGCGTCACTTAACGATATTTTGATCACGCAGTTCAAGACGGTCTTTA
CGTTGAGCGATACGGCAACTGCCTTCGTTCAATCGGCCTTTTACGGTGGGTACTTCTTGATCGCCCTTCCTGCGTCATAC
ATTATTCGGAAGAACACGTACAAGACAGCTATTATGACCGGTTTGACATTCTTCATTATTGGTTGTGCGCTGTTCTTCCC
GGCTTCTCACATGGCAACCTACGGGATGTTCTTAGCGGCCATCTTCGTTATCGCCATTGGTTTGAGTTTCTTGGAAACTT
CTTGTGACACTTACTCAACGATGATGGGGCCGCGTGAGTTTGCCAACCGGCGGATTAACATCTCCCAAACTTTGATTCCG
TTCGGGGATGCCATGGGGATCATCTTAGGGAAGTACCTGATCTTTAGCGGTCACAGTAACTTGCAAAATGAGTCTGCTGG
TTTGAACGCTGCACAAAAGATGGCACTAAACAAGGAAGTCCTTGCCCTGACGCTTCGTCCGTACAAGTACATCTTATTTG
TTCTGTTGATCCTGTTAGTATTGGTAGCTATCACGAAGATGCCATACGGGAAGGCGAAGGCGGACGCTAAGACTGCTAAC
CAACCAAGTATGGGTGAATCCTTAAACTACCTGTTCCACAACTGGCGCTTCATGAAGGCGGTTGGGGCCCAATTCCTTTA
CGTTGGGATCCAGACCTGTGTATGGTCCTTCACCATTCGTTTGGCACTGCGGATTGTTCCGGGGATTTCTGACCATGCCG
CAACTAACTACATGATCATTAGCTACATGGTATGGTTTGTTGGGAAGCTCTTTGCCAACTGGTTCATGAACCGTTACTCC
ATTACCAAGACGATGATTTGGTACTGTGTATTAGGGACGATTGTTCTTCTGTTGACTTGTTCAATCCACTCACCATTAGC
AATCTGGGGTGCCGTTGCGACTAGTTTCTTCTTCGGCCCAGTTTATCCAACGGTTTACGCTCATGGGTTGGACCAAATTA
AGGAAAAGCAACACACCGAAACTGGTGGGGCCTTGATGGTTATGTCCCTCGTTGGTGGGGCAGCCCTTCCGGTTATCATG
GGTCGTGTTTCTGACCTGACCGGCTCCATGCAATTCTCCTTCATCGTTCCGGCAATTGGTTTTGCCCTGATCCTGTGGTT
CTTCCTTTCTGAACACAAGATCGCTAAGAAGGAAGCTCAAAAGGCTTAA

Protein sequence :
MDNLKKQSWVQYDDGYLSKTPVWQYILVSLIFPMWGMAASLNDILITQFKTVFTLSDTATAFVQSAFYGGYFLIALPASY
IIRKNTYKTAIMTGLTFFIIGCALFFPASHMATYGMFLAAIFVIAIGLSFLETSCDTYSTMMGPREFANRRINISQTLIP
FGDAMGIILGKYLIFSGHSNLQNESAGLNAAQKMALNKEVLALTLRPYKYILFVLLILLVLVAITKMPYGKAKADAKTAN
QPSMGESLNYLFHNWRFMKAVGAQFLYVGIQTCVWSFTIRLALRIVPGISDHAATNYMIISYMVWFVGKLFANWFMNRYS
ITKTMIWYCVLGTIVLLLTCSIHSPLAIWGAVATSFFFGPVYPTVYAHGLDQIKEKQHTETGGALMVMSLVGGAALPVIM
GRVSDLTGSMQFSFIVPAIGFALILWFFLSEHKIAKKEAQKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoP ADD91723.1 permease DeoP Not tested PAI-I AL862 Protein 3e-90 50
unnamed CAE85172.1 hypothetical protein Not tested PAI V 536 Protein 1e-90 50