Gene Information

Name : LBFF_1917 (LBFF_1917)
Accession : YP_007996090.1
Strain : Lactobacillus fermentum F-6
Genome accession: NC_021235
Putative virulence/resistance : Unknown
Product : Integrase catalytic region
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1936861 - 1937847 bp
Length : 987 bp
Strand : -
Note : -

DNA sequence :
ATGAGCTATAAACATCTTACTATAAAAGAACGTGAAATACTTATGTTTTTACGAGCTAAGGGGTTATCTATCCGGGCTGT
CGCGTTACGGCTGGGGCGAAATCCAAGCACTATTTCACGGGAGTTAAAACGTTGTGCAGGTAATTATTCCCCAAGCAAAG
CAGATAATGACTATCATCAAAAGCGGCAGAATTGTCACAAGAAGCGGCTATTAGACAGCCATCCACAATTACGCCGTCAA
ATTGTTCATTACATCTTAGATCTGCACTGGTCACCAGAGCAGATTACCGCTCGCTTTAATAAGGAACATCAATGGTGTAT
TAGCTACAACACAATTTACCGTCATATCTATCAACACAATTTAGGTGAAAAGTACTCCTCACGTGGTGATACCGGTATTC
AGCGCCATCTCAGACATAAACATCGGACCCGGCATTCAAAGAATACTAGACGACATCGAGAAGTACAGACCGACTATATC
TCGATCCATGAGCGCCCTGGTTTTATCAACCAGCGTCAACGTATAGGTGACTGGGAAATTGATACTGTGATTGGTCGAAC
GGGTCACTCCATCCTTTTAACGGTTGTCGATCGGCTTAGTCGGCTTACGCTTATCAAAAAGGTTGTGCAAAAGGACTCGC
AGGAGATAAATAAAGGCTTAGTTGAACTGTTAGGGGCCATTCCTAAAGAATTTGTTCATTCTATTACACCAGATCATGGG
ACCGAATTTCTTCATCTTGATGAAATCAGCGAAAGGTTAGGTGTTACTGTCTATTGGCCCGATCCATATTCGCCTGAACA
GCGTGGAACAAATGAGAATACAAATGGATTAATCCGGGAATATTTTCCCAAGCGAACAGATATTGATAATTATACAGAAC
AGGACGTTGAACACTGCCAAAAGCAGTTAAATCAACGTCCTCGTAAAGTGTTAAACTATGAAACCCCATATGAAGTATTT
TTTGACAAACCGTTGCACTTAGTTTGA

Protein sequence :
MSYKHLTIKEREILMFLRAKGLSIRAVALRLGRNPSTISRELKRCAGNYSPSKADNDYHQKRQNCHKKRLLDSHPQLRRQ
IVHYILDLHWSPEQITARFNKEHQWCISYNTIYRHIYQHNLGEKYSSRGDTGIQRHLRHKHRTRHSKNTRRHREVQTDYI
SIHERPGFINQRQRIGDWEIDTVIGRTGHSILLTVVDRLSRLTLIKKVVQKDSQEINKGLVELLGAIPKEFVHSITPDHG
TEFLHLDEISERLGVTVYWPDPYSPEQRGTNENTNGLIREYFPKRTDIDNYTEQDVEHCQKQLNQRPRKVLNYETPYEVF
FDKPLHLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_02710 YP_005176177.1 ISApl1 transposase Not tested ICEPmu1 Protein 2e-52 44