Gene Information

Name : LBFF_1854 (LBFF_1854)
Accession : YP_007996027.1
Strain : Lactobacillus fermentum F-6
Genome accession: NC_021235
Putative virulence/resistance : Unknown
Product : Ribonucleoside-diphosphate reductase, alpha subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1871812 - 1873977 bp
Length : 2166 bp
Strand : -
Note : -

DNA sequence :
ATGACGGAAGAACGAACGGATCCACAATCCTATTTTTACTACAACAATCTAGTTAACATCCCGGAAAATGGCTCGATTGC
CGTCCATTACGATCAGGACGCCTTAAAGGCCTACTTTAAAGACCACATCATTCCCCAAACGGTTCGCTTTCAAAGCCCCG
CAAAACGGCGGGCAAAGCTGGTCGCTGACGACTACTTGGACGGGGCGGTTCTCGACCAGTACCCGGCGGAATTCATTGAC
CAATTAGAGGCCCGGGTGCGCGCCCACCACTTCCGCTTTAAGAGCTTCATGGGGGCTTACAAGTTTTACACCCAGTACGC
GATGAAGACCAACGACGGTAAGCGATTCCTGGAAGACTATAACGACCGGGTGGTGGCCAACGCCCTCTACTTGGCCCGCG
GCGACCAACAGTTAGCCAAGGACCTGACCGACGAGTTGATTAATCAGCGCTACCAGCCGGCGACGCCCACCTTTTTAAAC
GCCGGTAAGAAGCGGCGCGGCCAGATGGTGTCGTGCTTTTTGATTGACGTCCAGGACTCGATGCTATCGATTGGTCGGGC
GCTCAATTCGGCTCTCCAGCTGTCCCGGATTGGTGGCGGCGTTGGCGTCAACTTGTCGAACTTGCGGGCGGCTGGTGACC
CGATTAAGAAGATCGAAAACGCCTCGTCTGGGGTCCTGCCGGTGATGAAGTTGTTAGAGGACGCCTTTTCTTATTCCAAC
CAGCTGGGGCAACGTAACGGCGCCGGGGTGGTTTATTTAAACGTCTTTCACCCTGACATCATGGCCTTTTTGGAGACCAA
AAAGGAAAATGCCGACGAAAAGATCCGGGTCAAGACCCTCTCCTTGGGCCTGGTGGTGCCAGACAAGTACTACCAGTTGC
TCAAGTCCAACGCCCCAATGTATTTATTTAGCCCCTACGACGTCGAGCGGGAACTCAAGACCCCCTTTTCCTACGTTGAT
TTGACCAAGGAGTACGACCGCCTGGTGGCCAACCCGCGGATCAAGAAGACGGCGATTTCAGCCCGCGAGCTGGAGCAAAA
GATTTCCCGCCTCCAACAGGAATCGGGCTACCCCTATATCTTAAACATCGATCACGCCAATCGGGACAACCCGGTCGCCG
GTAAGATCATCATGTCCAACCTCTGCAGCGAGATCCTCCAGCCCCAGGAACCGTCGACTTTGACGTCCGACCTGTCTTAC
GAAACGGTCGGCACCGATATTTCCTGCAACCTGGGCTCGACCAACATCGATAACATGCTGCAGGCCCCGGACTTTGGCCG
TGCCGTTGAAGTGGCGGTGCGGGCGCTGACCAACGTCACTGACACCACCAACATTGAGGAGGTCCCTAGCATTGCTAAGG
GCAACCGCCTCTACCACACGATCGGCCTGGGGGCGATGGGCCTCCACACCGCCCTGGCCCGCCGGCAGATTGAGTACGGC
TCCCCGGAGGCACTCGAGTTTACCGAGGCCTACTTCTTAGCCCTGAATTACTACTCGCTTCTGGCCAGCCACCAGATTGC
TAAGGAACGGGGCGAGACCTTCGCGGGTTTTAAAGACTCGCGTTACGCCGATGGTTCTTACTTTGACGACTACGTGACTA
AGCCCTTCACCCTTAAGTTTGAAAAGAACCGGGCTGCTTTTTCAGGCGTTCACCTGCCGACGACGGCCGACTGGCAAGCC
TTAAAAGAAGCGGTGCAAACGGATGGTTTGTACCACCGTAACCGGCTGGCGGTGGCGCCGAATGGCTCGATTTCTTACGT
TAACGAAACTTCAGCCTCGCTGACGCCGATCACCCAACTGGTGGAACAGCGCCAGGAAAACAAGGTCGGTGCACTCTTTT
ATCCCGCCCCGTACCTTTCCAACGAGACTTTGCCTTATTACACGCCAGCTTACGACCTCGACCAGCGCAAGATCATTGAC
ACCTACGCCGTGGCCCAAAAACACGTCGACCAGGGGATGAGCCTAACCCTGTTTATGCGCTCGACCTTGCCGACCGGCCT
GTACGAGTGGAAAAAGCCTGACCAACCCAAGATGACGACGCGCGACCTAAACCGGCTGCGTAACTACGCCTGGACCAAGG
GGATCAAGTCGCTGTACTACATTCGGACCTTTACCACCGACGACGAAATTCACACCGCCAACGAGTGTGAATCCTGCATG
ATTTAA

Protein sequence :
MTEERTDPQSYFYYNNLVNIPENGSIAVHYDQDALKAYFKDHIIPQTVRFQSPAKRRAKLVADDYLDGAVLDQYPAEFID
QLEARVRAHHFRFKSFMGAYKFYTQYAMKTNDGKRFLEDYNDRVVANALYLARGDQQLAKDLTDELINQRYQPATPTFLN
AGKKRRGQMVSCFLIDVQDSMLSIGRALNSALQLSRIGGGVGVNLSNLRAAGDPIKKIENASSGVLPVMKLLEDAFSYSN
QLGQRNGAGVVYLNVFHPDIMAFLETKKENADEKIRVKTLSLGLVVPDKYYQLLKSNAPMYLFSPYDVERELKTPFSYVD
LTKEYDRLVANPRIKKTAISARELEQKISRLQQESGYPYILNIDHANRDNPVAGKIIMSNLCSEILQPQEPSTLTSDLSY
ETVGTDISCNLGSTNIDNMLQAPDFGRAVEVAVRALTNVTDTTNIEEVPSIAKGNRLYHTIGLGAMGLHTALARRQIEYG
SPEALEFTEAYFLALNYYSLLASHQIAKERGETFAGFKDSRYADGSYFDDYVTKPFTLKFEKNRAAFSGVHLPTTADWQA
LKEAVQTDGLYHRNRLAVAPNGSISYVNETSASLTPITQLVEQRQENKVGALFYPAPYLSNETLPYYTPAYDLDQRKIID
TYAVAQKHVDQGMSLTLFMRSTLPTGLYEWKKPDQPKMTTRDLNRLRNYAWTKGIKSLYYIRTFTTDDEIHTANECESCM
I

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 3e-179 53