Gene Information

Name : LBFF_1571 (LBFF_1571)
Accession : YP_007995746.1
Strain : Lactobacillus fermentum F-6
Genome accession: NC_021235
Putative virulence/resistance : Resistance
Product : DNA starvation/stationary phase protection protein Dps
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1595756 - 1596223 bp
Length : 468 bp
Strand : -
Note : -

DNA sequence :
ATGAAATACGAAAAGACCAAGGAAGTACTCAACCAACTCGTTGCTGACCTGAGCCAACTGGTGATGGTGGTTCACCAAAC
CCACTGGTACATGCGCGGGGAAAACTTCTTGAAGCTCCACCCGCTGATGGACGACTGGATGGACGATTTGAACGACCAAC
TAGACGAAATTTCCGAACGGCTGATCGCCCTTGATGGTTCACCATACTCCACCCTTAAGGAAATGGCGGAACACACCAAG
ATTCCCGACGAACCAGGCAACTGGAACAAGTCAACGCCCGAACGGTTCGAAGTGCTAGCCAAGGACTACCGTTACTTAGC
CGATCTCTACCAGCATGGGATCGAGATTAGTGACGATGAAAAGGACTTCTCCACCCAGGACATCTTCATTGGCTTCAAGA
CCGCGACCGAAAAGCGGCTTTGGATGATCCAAGCGGAACTGGGGAAGGCTCCGGAACGGGACCTCTAA

Protein sequence :
MKYEKTKEVLNQLVADLSQLVMVVHQTHWYMRGENFLKLHPLMDDWMDDLNDQLDEISERLIALDGSPYSTLKEMAEHTK
IPDEPGNWNKSTPERFEVLAKDYRYLADLYQHGIEISDDEKDFSTQDIFIGFKTATEKRLWMIQAELGKAPERDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0606 NP_814364.1 Dps family protein Not tested Not named Protein 8e-33 56
ef0119 AAM75320.1 EF0119 Not tested Not named Protein 5e-33 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBFF_1571 YP_007995746.1 DNA starvation/stationary phase protection protein Dps BAC0134 Protein 2e-26 48