Gene Information

Name : LBFF_1521 (LBFF_1521)
Accession : YP_007995696.1
Strain : Lactobacillus fermentum F-6
Genome accession: NC_021235
Putative virulence/resistance : Unknown
Product : Transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1542503 - 1543690 bp
Length : 1188 bp
Strand : -
Note : -

DNA sequence :
ATGAACCAGTTTAACAAAGATATTATCGCAGCGCTATCTTCCGACAAAGATATTACCCTGAATGAAGTCTTACGTCGTCA
AATTGAAGTGGCCGCTAATCAGTTCCTTCAAAATGAACTGACTGCGGTGCTAGGCTACGAACCACATACTCGGATCGACC
GATCAAAAGACGACGTGAACTACCGGAACGGGGCGTACACCCGCACGATCGACACTGAGTACGGTGAAATTAATCTGACG
ATCCCACGGGACCGGTTAAACAAGTATCAAAACGCCCTCTTTCCTCCTTACGTGCGTCGGACTGATGGACTGGAGGAAAT
GGTCATCAAGATGTACTCCAAGGGCGTCACAACTCGTGAAATCGCTGATATGGTTGAGAGAATGTACGGCCACTACTACT
CACCAACCACGGTTTCAAACATCACTAAGCGGACGGAACACCTGGTTGAAGAGTTCCACGAGCGCAAATTCAAGTACTCA
CAGTACGTCTGTGTGTTCCTCGATGCTACTTACATTCCGTTACGCCGTGGTACCGTTGAACGAGAAGCCGTTAACGTAGC
GATCGGAATTCGAAGTGACGGCGGTAAGGAAGTTCTTGACTACAGTATCGCACCGACCGAAAACGGAGCCGCTTGGTCTG
AACTACTCCAGGGATTACGCGCACGGGGGATTAAAGATATTCAGTTGTTCATCGCCGACGGTTTAGTTGGACTTCAATCT
GCGATTGAGGCTAACTACCCGCAGGCGAAGTTTCAACGGTGCTGGGTCCACGCAGAGCGCAACCTTTTAGGGTACGTTCG
CAAAAACGATCGCAGGGAGATTATCACCGACTTTAAGGCTATTCGGCAAGCAGAGAACCTACAAGCCGCCAAAGAACGAT
TGGCGGCTTTCAGTGCTAAGTGGGAGTCCAGTTATAAGCGTCGAATCAAGAATCTAGTCCAAATGGAGGAGCTATTCACG
TTCTTCAGTTTTCCAACTGCGATCCGTCAGACCATCTACTCGACGAACCTAATTGAGTCGTTCAATAAGAGCCTGAAGAA
GATGGTCCGACGTAAAGAGCAGTTCCCAAACGAAGGGGCCCTCGATCGCTTTATCATGACGCAAGTTATGGAGTACAACG
ATAAATTTGAGAATCGAGCACATCGGGGATTCAAGGACTGTCACGACACGCTTGATTCGATGTTTTAG

Protein sequence :
MNQFNKDIIAALSSDKDITLNEVLRRQIEVAANQFLQNELTAVLGYEPHTRIDRSKDDVNYRNGAYTRTIDTEYGEINLT
IPRDRLNKYQNALFPPYVRRTDGLEEMVIKMYSKGVTTREIADMVERMYGHYYSPTTVSNITKRTEHLVEEFHERKFKYS
QYVCVFLDATYIPLRRGTVEREAVNVAIGIRSDGGKEVLDYSIAPTENGAAWSELLQGLRARGIKDIQLFIADGLVGLQS
AIEANYPQAKFQRCWVHAERNLLGYVRKNDRREIITDFKAIRQAENLQAAKERLAAFSAKWESSYKRRIKNLVQMEELFT
FFSFPTAIRQTIYSTNLIESFNKSLKKMVRRKEQFPNEGALDRFIMTQVMEYNDKFENRAHRGFKDCHDTLDSMF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 4e-92 49
unnamed AAM21176.1 transposase Not tested Not named Protein 6e-92 48
unnamed AAM21184.1 transposase Not tested Not named Protein 6e-92 48
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 6e-92 48