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Name : LBFF_1117 (LBFF_1117) Accession : YP_007995294.1 Strain : Lactobacillus fermentum F-6 Genome accession: NC_021235 Putative virulence/resistance : Unknown Product : Succinyl-diaminopimelate desuccinylase Function : - COG functional category : - COG ID : - EC number : - Position : 1142081 - 1143232 bp Length : 1152 bp Strand : - Note : - DNA sequence : ATGGATCAAGCGCACGCAGAGGAGATTTTAAAAAAGGTGATCGCCATTCCAACCGTGAATGATAATGAAAAAGAGGTCGC CGATTACTTAGCGAGTCTTTTTGCCCCTTACGAAGATCAGGGGGTTACGATTGAGGAGTTGGCATATTCACCCGGCCGCA GCAATTTGATTGTCACGATTGGGGAGGGGGAGACCACGTTAGGCTTTTCCGGGCACCAAGACGTCGTGGACCCCGGTGAC CTGGCTGATTGGGACACCGACCCCTTTGTACCGACCATCAAGGAGGGGCGCCTGATTGGGCGTGGTGCTTCGGACATGAA GAGTGGTTTGGCGGCGGTTGTCTGCGCGATGCTGGCCATGCTGGAAGAAAAGAAGGTCCCGGGCAAGATCAAGTTAATCG CCACGGTCGGTGAAGAATCCGGCGAATACGGGGCGGCGCAAGTCACCGATGCCGGGCTCGCCGACGACCTGAGTGCGTTG GTGATCGCCGAACCGACCGACGGAATGCGGCAAATTTGCTACACCAGTAAGGGCGTCGTGGACTACCACGTTACCTCCAA GGGAATCGCCGCCCACTCTTCTAGGCCCCACGAGGGTGAAGATGCAATCGCCCACCTCTTGGAGTTTGCCAATGAGGTTC AAGCCCGCCTAGCCCGCTTGGATAAAAAGGATCCGGTACTCGGGAAACTTACCAGTTTGATTACCCTGATTAAGGGCGGT GAACAGATTAATTCCGTCCCGTCCCAAGCCGAGCTCTCTGGCAACATCCGGACGATCCCGGGTTACACTAACCAGGTGAT CTTTGATGTGATCGATGGCTTGATCGCCAAATTAAACGCCAAGCCGGGCTACCAGCTCAGCGTCGATTACATTTACCCCG AGGAACCGATGCCCGGCGACGCCCACTCCCCGCTGGTTCAACTGCTTCAAAAGGTTGGCCTGGAGGTCTTTGGTCACACC CTGACCCCGGTCGGCGGAACCGGGGCTAGTGATGGCTCCGAGTTCGTTCGGGCCAAGGGTGACTACCCAATCGTGATGGT CGGCCCCGGCAGTGACAGTCAGCACCAGCCTAACGAATGGGTCAGCCTCGCCGCCTATCACCAGGCGATTGCCTTCTACC AACAGTTCGCTAATGAATTCTTCGGCAAGTAA Protein sequence : MDQAHAEEILKKVIAIPTVNDNEKEVADYLASLFAPYEDQGVTIEELAYSPGRSNLIVTIGEGETTLGFSGHQDVVDPGD LADWDTDPFVPTIKEGRLIGRGASDMKSGLAAVVCAMLAMLEEKKVPGKIKLIATVGEESGEYGAAQVTDAGLADDLSAL VIAEPTDGMRQICYTSKGVVDYHVTSKGIAAHSSRPHEGEDAIAHLLEFANEVQARLARLDKKDPVLGKLTSLITLIKGG EQINSVPSQAELSGNIRTIPGYTNQVIFDVIDGLIAKLNAKPGYQLSVDYIYPEEPMPGDAHSPLVQLLQKVGLEVFGHT LTPVGGTGASDGSEFVRAKGDYPIVMVGPGSDSQHQPNEWVSLAAYHQAIAFYQQFANEFFGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 1e-67 | 43 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 3e-68 | 43 |
