Gene Information

Name : LBFF_1066 (LBFF_1066)
Accession : YP_007995243.1
Strain : Lactobacillus fermentum F-6
Genome accession: NC_021235
Putative virulence/resistance : Resistance
Product : Cystathionine beta-lyase / Cystathionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1092284 - 1093252 bp
Length : 969 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCCAACTAGAAGAAGGGGTCGCTGGCTTCGCCTTTGCCTCGGGATCAGCCGCCATCCACGCCGTCTTTTCCCTCTA
CTCCTCCGGCGATCACTTCATCGTTGGTAAGGACGTCTACGGGGGGACCTTCCGTTTGATCAACAAGGTCCTGAAGCGTT
TCGGCCTCGAATTTACGGTTGTCGACACCCAGGACCTAGCGGCGGTCGAAGCGGCCGTGCAAGACAACACGGTGGCCATT
TACTTTGAAACACCCACCAACCCGCTCTTGGAGGTTTCAGACATCGAAGCGATTGCTAAGATCGCCAAGAAGCATGGCTT
AAAGACGGTCATTGATAACACCTTTGCCACGCCGTATAACCAACGCCCGCTGACCCTGGGCGCCGACATTGTAGTTCACT
CCGCCACCAAGTACCTGGGCGGTCACTCCGACGTGGTAGGGGGGATTGCCGTTACGAACGACGAGGAAATTGCCGAACAG
TTGGCCTTCATCCAAAACTCAATTGGCGCTGTCCTTGGGCCCGATGACTCCTGGCTTCTGATGCGGGGGATTAAGACCCT
TGGCGCCCGAATGCGGATCCACCATGAAAACACCGCCGCCGTCATTGAACTGTTGGAAAAGGACCCGCGGGTTGCTCGGG
TACTGTACCCGGGGCTGCCAGATTTCCCGGGACATGATATCGCGGCTAAGCAAATGGACCACTTCGGCGCCATGGTGTCC
TTTGAACTGCAAGCGGGGCTCTCGGCAAAGAAGTTTGTCGAAAGCCTGCAGGTGATCACGCTGGCCGAAAGCCTCGGTGG
GATCGAGAGCCTGATTGAAGTGCCGGCGGTGATGACCCACGGTTCCATTCCGCGTGAGGTCCGCCTGCAAAACGGGATTA
AGGACGAATTAATCCGCTTGTCGGTTGGGATCGAAGACGAAGAAGACCTCGTGGCAGACTTACAGCAAGCCCTGGACCAA
CTGTCATAA

Protein sequence : 
MAQLEEGVAGFAFASGSAAIHAVFSLYSSGDHFIVGKDVYGGTFRLINKVLKRFGLEFTVVDTQDLAAVEAAVQDNTVAI
YFETPTNPLLEVSDIEAIAKIAKKHGLKTVIDNTFATPYNQRPLTLGADIVVHSATKYLGGHSDVVGGIAVTNDEEIAEQ
LAFIQNSIGAVLGPDDSWLLMRGIKTLGARMRIHHENTAAVIELLEKDPRVARVLYPGLPDFPGHDIAAKQMDHFGAMVS
FELQAGLSAKKFVESLQVITLAESLGGIESLIEVPAVMTHGSIPREVRLQNGIKDELIRLSVGIEDEEDLVADLQQALDQ
LS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-65 52
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-66 52
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-57 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBFF_1066 YP_007995243.1 Cystathionine beta-lyase / Cystathionine gamma-lyase BAC0207 Protein 4e-61 47