Gene Information

Name : LBFF_1016 (LBFF_1016)
Accession : YP_007995193.1
Strain : Lactobacillus fermentum F-6
Genome accession: NC_021235
Putative virulence/resistance : Resistance
Product : Glycine/betaine ABC transporter ATP-binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1053906 - 1054673 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence : 
ATGAACCAACCCGAAATTGAATTTGAACACGTCGTTAAGCGCTTTGGTCAAACAACGGTCATCCCGGACCTGTCCTTTAC
CATTAACAAGGGGGAGTTCGTGACCGTGCTGGGGTCATCTGGCTCGGGGAAGACGACGACCCTCAAAATGATCAACGGTC
TTTGGCAACCGACCAGCGGCACGGTTAAGATCGGTGGTAAAGAATTAACGGAGCACAACCAAGTGGACCTGCGGCGCCAC
ATCGGCTACGTGGTCCAACAGATTGCCCTCTTTCCCCACCTGACAATCAAGCAAAACATCGCCGTTGTTCCTAAGCTGTT
GGGGTGGGAGCAAGCTAAAATTGACCAGCGAGTTGACGAACTATTGGACCTAGTCAAACTTCCCAGCGACCAGTACGCTG
ATCGCTACCCCGCCCAGTTATCCGGGGGGCAGCAGCAACGCGTCGGCCTCGCCCGCGCCCTGGCCGTCAACCCCGATTTC
ATCCTCTTTGACGAACCGCTCGGCGCCCTAGATGCCTTAACCCGGATTGATTTGCAAAAGGAAATCAAAAACCTCCACGC
TTCGCTTGCCGATAAGACCTTTTTCTTTGTTACCCACGACATTAACGAGGCGCTTTATTTGGGGCAGCGGGTCATGGTGA
TGAACAGGGGACGCCTCGAACAGTTTGCCAGCCCGGAAACGATCGTCCAACACCCGGCGAGCCCCTTTGTTGAAGAGCTA
CTGGCAACCGAGGAGCGTAACCAGGAACTCTGGAGGCGACTGCAATGA

Protein sequence : 
MNQPEIEFEHVVKRFGQTTVIPDLSFTINKGEFVTVLGSSGSGKTTTLKMINGLWQPTSGTVKIGGKELTEHNQVDLRRH
IGYVVQQIALFPHLTIKQNIAVVPKLLGWEQAKIDQRVDELLDLVKLPSDQYADRYPAQLSGGQQQRVGLARALAVNPDF
ILFDEPLGALDALTRIDLQKEIKNLHASLADKTFFFVTHDINEALYLGQRVMVMNRGRLEQFASPETIVQHPASPFVEEL
LATEERNQELWRRLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-49 48
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 9e-49 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBFF_1016 YP_007995193.1 Glycine/betaine ABC transporter ATP-binding component BAC0600 Protein 2e-24 41