Gene Information

Name : KPR_4579 (KPR_4579)
Accession : YP_007993553.1
Strain : Klebsiella pneumoniae SB3432
Genome accession: NC_021232
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4699239 - 4700078 bp
Length : 840 bp
Strand : +
Note : highly similar to putative transposase InsD for insertion element IS2-9 from Escherichia coli strain K12 (sp|P0CF61)

DNA sequence :
GTGTCGCGTGCGCAGTTGCACGTAATTCTCAGACGAACCGATGACTGGAAAGATGGTCGCCGCAGCCGTCACTCAGATGA
TACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCCACGTATGGTTATCGTCGGGTATGGGCGCTGCTTC
GCAGACAGGCCGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTG
CTTGAGCGAAAACCCGCTGTACCGCCATCGAAACGGGCACATACTGGCAAAGTGGCCGTGAAAGAAAGCAATCAACGATG
GTGCTCTGACGGGTTCGAGTTCCGCTGTGATAACGGAGAAAAACGGCGAGTCACGTTCGCGCTGGACTGCAGTGACCGTG
AGGCACTGCACTGGGCAGTCACTACGGGCGGCTTCGACAGTGAAACAGTACAGGACGTAATGCTGGGAGCGGTGGAACGC
CGCTTCGGCAACGAGCTTCCGGCGTCTCCAGTAGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACG
GCAGTTTGCCCGGATGTTGGGGCTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCT
TCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCTAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAG
GCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCACTGGGTTATCGCTCGCCACGGGAATATCTACGGCAGCAGGC
CAGTAATGGGTTAAGTGATAACAGGTGTCTGGAAATATAG

Protein sequence :
MSRAQLHVILRRTDDWKDGRRSRHSDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALL
LERKPAVPPSKRAHTGKVAVKESNQRWCSDGFEFRCDNGEKRRVTFALDCSDREALHWAVTTGGFDSETVQDVMLGAVER
RFGNELPASPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAE
AFEHYNEWHPHSALGYRSPREYLRQQASNGLSDNRCLEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 2e-117 97
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 3e-119 97
insD YP_002414033.1 insertion element IS2 transposase InsD Not tested Not named Protein 1e-124 97
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 2e-117 96
S4061 NP_839230.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 7e-125 96
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 5e-116 95
S4050 NP_839218.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 2e-124 95
SF3708 NP_709447.1 IS2 transposase TnpB Not tested SHI-2 Protein 2e-124 95
SF3721 NP_709460.1 IS2 transposase TnpB Not tested SHI-2 Protein 2e-124 95
S3189 NP_838472.2 insertion element IS2 transposase InsD Not tested SHI-1 Protein 1e-123 95
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB Not tested LEE Protein 4e-121 94
aec49 AAW51732.1 Aec49 Not tested AGI-3 Protein 3e-110 83
unnamed CAC39283.1 hypothetical protein Not tested LPA Protein 3e-77 61
c5197 NP_757045.1 transposase insD Not tested PAI II CFT073 Protein 3e-61 60
insD YP_854263.1 IS2 transposase Not tested PAI I APEC-O1 Protein 5e-61 60
insD AAZ04432.1 IS2 transposase Not tested PAI I APEC-O1 Protein 4e-61 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KPR_4579 YP_007993553.1 hypothetical protein VFG1732 Protein 5e-125 97
KPR_4579 YP_007993553.1 hypothetical protein VFG0649 Protein 2e-116 95
KPR_4579 YP_007993553.1 hypothetical protein VFG0608 Protein 7e-125 95
KPR_4579 YP_007993553.1 hypothetical protein VFG0621 Protein 7e-125 95