Gene Information

Name : ybdN (KPR_3929)
Accession : YP_007992903.1
Strain : Klebsiella pneumoniae SB3432
Genome accession: NC_021232
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4042546 - 4043766 bp
Length : 1221 bp
Strand : +
Note : highly similar to uncharacterized protein YbdN from Escherichia coli strain K12 (sp|P77216)

DNA sequence :
TTGTTTATTAAATATCCCTTACCGGAATCGGTGCTGCAGGCAACTGAGCAGCGGATCCAGTGGGTCATGGATAATTTTTC
GCGCATCTGTGTCTCTTTTTCCGGGGGAAAAGACTCCACCGTTATGCTGCATTTAACCGCCCAGGCGGCGCGGTTACAGG
GGAAAAAAATCTGCGTGTTGTTTATTGACTGGGAAGCGCAGTTCTCCTGCACCATCGCCCACTGTGAAAAACTGCGTGCG
CTGTATGCGGATGTCATCGAAACCTTTTACTGGGTCGCCCTGCCGCTCACCACCCAAAATGCCCTGACGCAGTATAAGCC
GCAATGGCAATGCTGGGAGCCCGGAACCGAGTGGGTACGCCAGCCGCCGCCCTGGGCCATTACCCACCCGGGCTATTTTT
CATTTTATCAACCCGGAATGAGCTTTGAAGCCTTCGTCAGCCACTTCGCCGAGTGGTTTTCGCAGCGTCGTCCCGCCGCC
GTGCTGGTGGGCATTCGCGCCGACGAATCGCTAAATCGCTTTATGACGATTTCTTCACAGCGTAAACAGCGCTTCGCCGA
CGATAAACCATGGACCACTTCAGTGCCGGGCGGCCACGCCTGGTACATCTACCCGCTCTATGACTGGAAAACCGCCGATA
TCTGGACCTGGTTTGCCAAAAGCGGCGAGCCCTATAACCCGTTGTACGATCTGATGTATCAGGCCGGGGTGCCGCTGCGC
TATATGCGCATTTGCGAACCGTTTGGTCCCGAGCAGCGCCAGGGGGTGTGGCTGTATCACGTGCTGGAACCTGAGCGCTG
GGCCGCGATGTGCCAGCGAGTGAGCGGCGCGCACAGCGGCGGGGTCTATGCCGGGCATGATAATCAGTTCTACGGTCATC
GGAAAATCGACAAGCCCGACCACCTGACGTGGAAAAGCTACGCCCTGTTCCTGCTCGACAGCATGCCGGAAACCACCGCC
GAGCACTACCGCAATAAAATCGCCGTCTACCTGCGCTGGTACCAGAAAAAAGGTATGGAGGATATTCCGGATACCCAACC
TGCGGACATTGGCACCAAAGATATCCTATCCTGGCGGCGAGTCTGCAAAGTACTGCTCAATAACGATTACTGGTGCCGTC
AGCTTTCGTTTAGCCCAACCAAAAGCAGCCACTATCAGCGCTACCGTAAACGCATGGAAAAACATCGCCAACAATGGGGG
ATTTTATGCAACAACAACTGA

Protein sequence :
MFIKYPLPESVLQATEQRIQWVMDNFSRICVSFSGGKDSTVMLHLTAQAARLQGKKICVLFIDWEAQFSCTIAHCEKLRA
LYADVIETFYWVALPLTTQNALTQYKPQWQCWEPGTEWVRQPPPWAITHPGYFSFYQPGMSFEAFVSHFAEWFSQRRPAA
VLVGIRADESLNRFMTISSQRKQRFADDKPWTTSVPGGHAWYIYPLYDWKTADIWTWFAKSGEPYNPLYDLMYQAGVPLR
YMRICEPFGPEQRQGVWLYHVLEPERWAAMCQRVSGAHSGGVYAGHDNQFYGHRKIDKPDHLTWKSYALFLLDSMPETTA
EHYRNKIAVYLRWYQKKGMEDIPDTQPADIGTKDILSWRRVCKVLLNNDYWCRQLSFSPTKSSHYQRYRKRMEKHRQQWG
ILCNNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 8e-127 63
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 2e-127 63
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 3e-127 62
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 3e-127 62
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-128 62
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-128 62
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-128 62
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 4e-128 62
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 3e-127 61
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 3e-127 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybdN YP_007992903.1 hypothetical protein VFG1504 Protein 2e-128 62