Gene Information

Name : kdsB (KPR_3633)
Accession : YP_007992608.1
Strain : Klebsiella pneumoniae SB3432
Genome accession: NC_021232
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3721934 - 3722680 bp
Length : 747 bp
Strand : -
Note : highly similar to 3-deoxy-manno-octulosonate cytidylyltransferase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T710)

DNA sequence :
ATGAGTTTCGTGGTCATTATTCCTGCGCGTTTCGCCTCCACGCGCCTGCCGGGAAAACCACTGCAGGACATTAATGGTAA
GCCGATGATTGTCCATGTTCTGGAGCGCGCTCGCGAATCCGGCGCGGATCGCATTATTGTCGCCACCGATCACGAAGATG
TCGCCCGGGCGGTTGAAGCCGCCGGCGGCGAGGTCTGTATGACCCGCGCCGACCATCAGTCCGGCACCGAACGGCTGGCG
GAAGTGGTGGAAAAGTGTGCGTTCAGCGATGACACCATTATCGTCAATATTCAGGGCGATGAGCCGATGATCCCCCCGGC
GATTGTCCGCCAGGTGGCGGAGAATCTGGCTGCCAGCAGCAGCGGAATGGCGACCCTGGCGGTACCGATCCATGATGCGG
AAGAGGCGTTTAACCCGAATGCGGTCAAAGTGGTGATGGATGCCAAGGGTTACGCGCTCTATTTCTCCCGCGCGACTATT
CCCTGGGATCGCGATCGCTTTGCCCAATCCCGCGAGACCATCGGTGACTCCCTGCTGCGTCACATCGGCATCTATGGCTA
TCGCGCCGGCTTTATCCGCCGCTATGTCAGCTGGGCGCCGAGCCCGCTGGAGCAGATTGAAATGCTCGAGCAGCTGCGAG
TGCTGTGGTATGGCGAGAAAATCCATGTCGCCGTAGCGGCGGAAGTGCCCGGCACCGGCGTGGATACCCCGGAAGATCTG
GAGCGCGTCCGCGCTGAGCTGCGTTAG

Protein sequence :
MSFVVIIPARFASTRLPGKPLQDINGKPMIVHVLERARESGADRIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLA
EVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLAASSSGMATLAVPIHDAEEAFNPNAVKVVMDAKGYALYFSRATI
PWDRDRFAQSRETIGDSLLRHIGIYGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAAEVPGTGVDTPEDL
ERVRAELR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 3e-34 46
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 3e-34 46
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-34 46