Gene Information

Name : sitA (KPR_3413)
Accession : YP_007992389.1
Strain : Klebsiella pneumoniae SB3432
Genome accession: NC_021232
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3505772 - 3506686 bp
Length : 915 bp
Strand : +
Note : highly similar to putative ABC transport system, periplasmic binding protein SitA from Escherichia coli (tr|B7JCA9)

DNA sequence : 
ATGCTTCAACTAAAGACGGTAAAGATAATCCTGTTAAGCACCTTTATCACAGGACTGACAGCTATTCATGGCGCTTATGC
TGCTGAAAAGTTTAAGGTCATCACGACATTCACGGTAATTGCTGACATGGCACAGAACGTGGCAGGGGACGCCGCCGAAG
TCAGTTCGATTACCCGGCCTGGCGCAGAAATCCATGAATATCAGCCTACAACCGGAGATATAAAGCGTGCTCAGGGGGCA
CAGCTAATCCTTTCAAATGGCTTCAACCTCGAACTCTGGTTTCAAAAATTTTATCAACGATTGAAAAACGTACCGGATGT
GGTGGTCACTACAGGTATCACTCCAATAAGCATTACCGAGGGTCCGTATGATGGAAAACCAAATCCTCATGCCTGGATGT
CGCCTGATAATGCACTGATTTATGTAGATAATATTCGTGATGCGCTGGTGAAATACGATCAGGGAAATGCTGAAACTTAC
AAAGCCAATGCGGACGCCTATAAACAAAAGATCCGTCAGACGCTTGAACCGCTGCGTAAACAAATAGAAACCCTCCCTGC
CGAACAGCGCTGGCTGGTATCGAGCGAAGGCGCATTTTCTTATCTGGCACGCGATCTGGGACTGAAAGAACTCTATCTAT
GGCCGATTAATGCCGATCAACAGGGAACCCCGCAACAGGTTCGTAACGTAATCGATAAAGTCCGGCAGAATAAAATTCCG
GCGGTATTTAGCGAAAGTACCGTTTCCAATAAACCAGCCCGTCAGGTCGCACGCGAAACAGGTGCACATTATGGGGGCGT
ACTTTATGTGGATTCCCTGAGCGCAGCAAATGGCCCGGTTCCCACCTACCTTGATCTGCTGAACGTCACTACCCGGACAG
TGGTACAGGGTTTGCACAGCGGAATGAAGGAGTAA

Protein sequence : 
MLQLKTVKIILLSTFITGLTAIHGAYAAEKFKVITTFTVIADMAQNVAGDAAEVSSITRPGAEIHEYQPTTGDIKRAQGA
QLILSNGFNLELWFQKFYQRLKNVPDVVVTTGITPISITEGPYDGKPNPHAWMSPDNALIYVDNIRDALVKYDQGNAETY
KANADAYKQKIRQTLEPLRKQIETLPAEQRWLVSSEGAFSYLARDLGLKELYLWPINADQQGTPQQVRNVIDKVRQNKIP
AVFSESTVSNKPARQVARETGAHYGGVLYVDSLSAANGPVPTYLDLLNVTTRTVVQGLHSGMKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-110 74
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-110 74
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-111 74
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 9e-111 74
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-110 74

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_007992389.1 hypothetical protein BAC0349 Protein 5e-111 74
sitA YP_007992389.1 hypothetical protein BAC0439 Protein 3e-91 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_007992389.1 hypothetical protein VFG0525 Protein 5e-111 74