Gene Information

Name : vinT (KPR_1977)
Accession : YP_007990957.1
Strain : Klebsiella pneumoniae SB3432
Genome accession: NC_021232
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2067061 - 2068221 bp
Length : 1161 bp
Strand : -
Note : highly similar to integrase from Enterobacteria phage Sf6 (sp|P37317)

DNA sequence : 
ATGCTCACCGTTAAGCAGATAGAGGCCGCCAAGCCTAAAGACAAACCATACCGCATGCTCGACGGCAACGGCCTTTACCT
GTACGTTCCGGCGTCTGGCAAAAAGGTGTGGCAGTTGCGCTATAAGCTCGACGGCAAAGAGAAGGTGCTGACATTGGGAA
AATACCCTCTCATGTCATTGCAGGAAGCCAGGGATAAAGCGTGGACCGCAAGGAAGGATGTTTCTGTCGGGGTCGATCCG
GTTAAGGCCAAAAAGTTGTCTGTGAAGGACAATTCATTTTCAGCTATTTATCATGAATGGTACGACCATAAGCGGCAGGT
TTGGTCAGAAGGATATGCGGATGAACTTTCTCGCATGTTCCGTGACGATATTCTGCCGATGATCGGGTATCTGGAAATAC
AGGATATTGAGCCGATGCAGATACTTGAGGTGATCCGGAGGTTTGAAGAACGCGGGGCAATGGAGAGGGCAAATAAAGCC
AGAAGAAGATGTGGCGAGGTATTCAGGTATGCGATCGTTACAGGAAGGGCCAAATATAATCCGGCTCCTGACCTTGCTGA
TGCCATGAAGGGATATAGAAAGAAAAACTACCCTTTCCTTCCTGCAGATCAGATACCAGCATTCAATAACGCGCTATCTG
GCTTTTCCGGAAGTATTATTTCGAAAATTGCCACACAGGTTTTGCAATATACTGCGCTGCGCACAAAAGAACTCCGTTCT
ATGCAATGGGAAAACGTCGACTTTGAAAACAGGATGATAACCATCGACGAAGAGGTAATGAAAGGGCGCCGCGTTCATGT
GGTTCCGATGTCAGATCAGGTAATAAATCTCCTGAATACTCTCAAACCGATCACAAGCCCTGTTTCCTCTTTTGTGTTCG
CCGGGCGGAATGATAAGAAAAAGCCCATCAGCGAGAATGCCGTATTATTAGTTATCCGACAGATTGGCTATGAGGGGCTG
GCGAGCGGGCATGGATTCCGCCACCAGTTCAGCACAATAATGAATGAGCATGGCTGGCCAGCGGACGCGATTGAAAAACA
ACTCGCGCACACCGCCAGCGGGTCAATACGCGGCATTTACAACCATGCTCAGTATCTGGATAAACGCAGAGAGATGATGC
AGTGGTGGGCTGATTACATCGATGGTCGTGCAGTCCAGTAA

Protein sequence : 
MLTVKQIEAAKPKDKPYRMLDGNGLYLYVPASGKKVWQLRYKLDGKEKVLTLGKYPLMSLQEARDKAWTARKDVSVGVDP
VKAKKLSVKDNSFSAIYHEWYDHKRQVWSEGYADELSRMFRDDILPMIGYLEIQDIEPMQILEVIRRFEERGAMERANKA
RRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNYPFLPADQIPAFNNALSGFSGSIISKIATQVLQYTALRTKELRS
MQWENVDFENRMITIDEEVMKGRRVHVVPMSDQVINLLNTLKPITSPVSSFVFAGRNDKKKPISENAVLLVIRQIGYEGL
ASGHGFRHQFSTIMNEHGWPADAIEKQLAHTASGSIRGIYNHAQYLDKRREMMQWWADYIDGRAVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec33 AAW51716.1 Int Not tested AGI-3 Protein 2e-92 52
int CAC39282.1 integrase Not tested LPA Protein 9e-93 52
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 5e-92 52
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 7e-92 52
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 7e-92 52
int AAC31482.1 CP4-like integrase Not tested LEE Protein 6e-93 51
int ACU09430.1 integrase Not tested LEE Protein 6e-93 51
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 7e-93 51
ECs4534 NP_312561.1 integrase Not tested LEE Protein 7e-93 51
int AAD44730.1 Int Not tested SHI-2 Protein 2e-91 51
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 7e-88 50
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 6e-84 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vinT YP_007990957.1 hypothetical protein VFG0598 Protein 3e-92 52
vinT YP_007990957.1 hypothetical protein VFG0783 Protein 3e-93 51