|
Name : samB (pKPR_0119) Accession : YP_007988975.1 Strain : Genome accession: NC_021231 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 102979 - 104253 bp Length : 1275 bp Strand : + Note : highly similar to protein SamB from Salmonella typhimurium (sp|P23832) DNA sequence : ATGTTTGCCCTGGCTGATGTTAACAGTTTCTATGCCTCCTGCGAGAAGGTGTTCCGCCCCGACCTCCAAAATCGACCTGT CATTGTTCTCAGCAACAATGACGGGTGTGTCATCTCACGCAGCACCGAGGCAAAAGCCCTCAATATCCCGATGGGGGAGC CCTGGTTTAAGCTGAAGGCCACGGCTGAGAAGTCAGGCGTGGTGGTGTTCTCAAGTAATTATTCGTTGTACCACTCGATG TCGGAGCGCGTCATGCGCAGCCTGGAAGCCCTTTCCCCCCGCGTGGAGCAGTACAGTATCGATGAGATGTTTCTCGACGT CGCGGGCATCGACCGCTGCGTGGCGTTTGAGGACTTCGGTCGTCAGCTGCGTGAATATGTTCACCGCCATACGGCCCTGA CCGTCGGCGTCGGCATGGGGCCGACCAAAACGCTGGCCAAAAGCGCGCAGTGGGCGTCAAAGCAGTGGCACCAGTTCGGC GGAGTACTGGCCATCACCCCCGATAATCCACGCCGGACAGCAAAACTGCTCGCCCTGCAGCCAGTGGAAGAAGTCTGGGG GGTGGGCAGAAAATTATCAGGGAAGCTGAACATAATGGGGATAAGCACCGCGCTGCAGCTGGCGCAGACAAGCCCGTCAT TCATCCGTAAGCATTTCAGCGTGGTGCTGGAGCGGACGGTCAGGGAGCTTCAGGGAGAAAGCTGCATCTCGCTGGAAGAA GCGCCCCCGCCAAAACAACAGATTGTCTGCAGCCGTTCTTTCGGAGAACGCGTTACGACTTACGAGGCAATGCGTCAGGC CATCTGCCAGCATGCAGAACGCGCAGCGGAGAAGTTGCGCGGCGAGCGACAGTTCTGCAGGCATATTGCTGTATTTGTGA AGACGTCATCGTTCGCAGTGAACGAACCGTATTACGGGAATGTGGCCAGTGAGAAGCTGATGACGCCCACACAGGATACC AGGGACATCATTGCTGCCGCCACAACGGCTCTGGAGCGCATCTGGAAAGATGGGCACCGGTATGCCAAAGCCGGAGTTAT GCTGAATGACTTCACCGGCTCTGGCGTGTCTCAGCTGCAGCTGTTCGACGAACGTCCGCCACGTCCTCACAGCGCTGAAC TGATGAAGGTTTTGGACGGGATCAACAACTCAGGGCTGGGGAAGATCTGGTTTGCCGGTAGAGGAATTGCCCCGGAATGG CAGATGAAACGAGAGATGCTTTCACCTGCTTATACAACGCGCTGGAGTGATATTCCTGTGGCTCGGCTTTTGTAA Protein sequence : MFALADVNSFYASCEKVFRPDLQNRPVIVLSNNDGCVISRSTEAKALNIPMGEPWFKLKATAEKSGVVVFSSNYSLYHSM SERVMRSLEALSPRVEQYSIDEMFLDVAGIDRCVAFEDFGRQLREYVHRHTALTVGVGMGPTKTLAKSAQWASKQWHQFG GVLAITPDNPRRTAKLLALQPVEEVWGVGRKLSGKLNIMGISTALQLAQTSPSFIRKHFSVVLERTVRELQGESCISLEE APPPKQQIVCSRSFGERVTTYEAMRQAICQHAERAAEKLRGERQFCRHIAVFVKTSSFAVNEPYYGNVASEKLMTPTQDT RDIIAAATTALERIWKDGHRYAKAGVMLNDFTGSGVSQLQLFDERPPRPHSAELMKVLDGINNSGLGKIWFAGRGIAPEW QMKREMLSPAYTTRWSDIPVARLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 2e-166 | 80 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 2e-166 | 80 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 3e-81 | 46 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 1e-63 | 43 |
