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Name : clpC (LBP_cg0784) Accession : YP_007986461.1 Strain : Lactobacillus plantarum P-8 Genome accession: NC_021224 Putative virulence/resistance : Virulence Product : ATPase with chaperone activity, ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 839603 - 842107 bp Length : 2505 bp Strand : + Note : - DNA sequence : ATGGATAACTTATTTACACCTAGTGCCAAAAGTGTGCTGGTACTGGCACAGGAACAGGCCAAATATTTCAAGCATCAGGC AGTTGGTACGGAGCATTTGCTATTAGCATTGGCCATCGAAAAGAATGGAATTGCTAATAAGGTGCTACAACAATATGCCG TTAGTGAAGATGACATTCGTGAAGAAATCGAACGGTTCACTGGCTATGGGACGTTGAGCAATGTTGGCAAGGATACTTAC TTGCCATATTCACCAAAGGCCAAAGAAATTTTGTCCGTTGCCGGTGATGAAGCAAAACGGCTCGGTGCCAACAAGATTGG AACGGAACATTTGTTGTTAGCGATGCTCTCTGATGAAAGTATCCTTTCCTCGCGAATTTTAATGAATTTAAACTTAGATC TAGGTCAGACGCGTAAAGTCGTTCTTCGCAAGCTAGGTGTCAGTGACGCCATGAGTAAGCGCAAGGGTAACGCGGCTAAT CGCGGTGGCAAGAAGACTGAAGGAACGCCAACCTTGGATTCTCTGGCGCGCGATTTGACCCAATTAGCTAGTGAACAAGA AATGGACCCGGTAGTAGGTCGTTCCAAGGAAGTCAAACGGGTCATTCAGATCCTGTCACGGCGGACGAAGAATAATCCGG TCTTGATTGGTGAACCTGGGGTTGGGAAGACTGCAATCGCCGAAGGTCTAGCCCAAAAGATTGTGGCCGGTGATGTGCCA ACTGATATGGCAGATAAGCGTTTGATGATGCTCGATATGGGATCGTTAGTCGCTGGGACAAAGTATCGTGGTGAATTCGA AGACCGCCTGAAAAAAGTGATTGATGAAATTTACAACGATGGCCATGTGATCTTATTTATCGATGAATTGCATACCTTGA TTGGTGCCGGTGGTGCTGAAGGGGCTATTGATGCCTCTAATATTCTGAAACCCGCACTTGCACGAGGGGAACTCCAAACG ATTGGGGCAACCACTTTAAATGAGTATCAAAAGTACATTGAATCTGACGCTGCGTTGGAACGGCGTTTTGCAACGGTCAT GGTCAATGAACCGACCGAAGACGAAGCCGTTGAAATCTTAGATGGACTACGGCCACGCTATGAAGAACATCATCGGGTTA CGATTACGGATGAAGCTGTTGATCAAGCAGTCAAGCTATCCAGCCGGTATATCAGTGATCGTTTCTTGCCTGATAAGGCC ATTGACTTGATGGATGAGGCGGCAGCTAAAGTCCGCATCGATCAGATGGATCAACCAACAAAGCTATCCAAGAACCAGGA CAAGTTAGCGCAACTGCGTGAGGATAAGGAAACAGCGATCGAAGCACAAGATTTTGAACAGGCCGCTGATATTCGTAAGC AGGAGATGCAACTGAAGCAACGCCTAGATCGAATCGAAGCTGACCAAGACGCCGAAGTGACTGAGGGGGCAACACCACAC TATGATTTACAAGTCACAGGTGAGGATATTGCTCAGGTCGTTGCCGAATGGACCGGGGTTCCGTTAACGCAATTGCAAAA ATCTGAAAGTGAACGCTTAGTTAACTTGGAAAAGATTTTGCATGAACGGGTTGTTGGACAGCCAGAAGCCGTATCCGCAG TGGCTCGTGCTATTCGCCGTGCGCGCAGCGGGTTGAAAGATCCGAGTCGGCCAATTGGTTCCTTTATGTTCTTAGGACCA ACTGGGGTTGGTAAGACGGAGCTAGCAAAAGCCTTGGCAGCAGCGATGTTCGGGTCTGAAGATAATATGATTCGGATCGA CATGTCTGAATACATGGAACGCTATTCGACTAGTCGTTTGATTGGCTCGGCACCTGGTTACGTTGGTTATGACGAGGGCG GTCAGCTGACAGAGAAGGTTCGCCAGAAACCATACTCGGTCGTGCTATTTGATGAAGTTGAAAAAGCTCATCCGGACGTC TTTAACATTTTGTTACAAGTTTTGGATGACGGCTACTTGACGGATTCTAAGGGTCGGAAGGTAGACTTCAGAAATACGAT TCTGATTATGACGTCGAACCTTGGGGCAACCACACTTCGTGATGAAAAATCAGTTGGTTTTGGTGCAACTGATAAGGCCA ATGACTACAATGCGGTTGCTGCGACGATTCGAGCAACGTTAAAACAGACGTTCCGCCCAGAATTCTTAAACCGGATCGAC GAAACAATCGTCTTCCATTCATTGAATAAGGAAGAATTACACGAAATCGTTAAGTTGATGTCACAAGAAATTGTTGATCG AGTGGCCCAACAAGGTATCAAGATCAAAATCACTCCGGCTGCCATTGACGTGGTTGCGAAGGCTGGCTTTGACCCTGAGT ACGGAGCACGACCAATTCGACGGGCATTACAGACTGAAATCGAAGATCGGTTGAGTGAAGAATTATTGACCGGCGCGATC AAGGTCGATGACCAAGTTACGATTGGTGCTAGCAAGGGTACCATTACAATTAATATTAAAAACCAGCCTAAGGCAGATGG TCGTTCGACCGTTTCCTCAAAGTAG Protein sequence : MDNLFTPSAKSVLVLAQEQAKYFKHQAVGTEHLLLALAIEKNGIANKVLQQYAVSEDDIREEIERFTGYGTLSNVGKDTY LPYSPKAKEILSVAGDEAKRLGANKIGTEHLLLAMLSDESILSSRILMNLNLDLGQTRKVVLRKLGVSDAMSKRKGNAAN RGGKKTEGTPTLDSLARDLTQLASEQEMDPVVGRSKEVKRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQKIVAGDVP TDMADKRLMMLDMGSLVAGTKYRGEFEDRLKKVIDEIYNDGHVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQT IGATTLNEYQKYIESDAALERRFATVMVNEPTEDEAVEILDGLRPRYEEHHRVTITDEAVDQAVKLSSRYISDRFLPDKA IDLMDEAAAKVRIDQMDQPTKLSKNQDKLAQLREDKETAIEAQDFEQAADIRKQEMQLKQRLDRIEADQDAEVTEGATPH YDLQVTGEDIAQVVAEWTGVPLTQLQKSESERLVNLEKILHERVVGQPEAVSAVARAIRRARSGLKDPSRPIGSFMFLGP TGVGKTELAKALAAAMFGSEDNMIRIDMSEYMERYSTSRLIGSAPGYVGYDEGGQLTEKVRQKPYSVVLFDEVEKAHPDV FNILLQVLDDGYLTDSKGRKVDFRNTILIMTSNLGATTLRDEKSVGFGATDKANDYNAVAATIRATLKQTFRPEFLNRID ETIVFHSLNKEELHEIVKLMSQEIVDRVAQQGIKIKITPAAIDVVAKAGFDPEYGARPIRRALQTEIEDRLSEELLTGAI KVDDQVTIGASKGTITINIKNQPKADGRSTVSSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_007986461.1 | ATPase with chaperone activity, ATP-binding subunit | VFG0079 | Protein | 0.0 | 59 |
| clpC | YP_007986461.1 | ATPase with chaperone activity, ATP-binding subunit | VFG0080 | Protein | 3e-149 | 49 |
| clpC | YP_007986461.1 | ATPase with chaperone activity, ATP-binding subunit | VFG2084 | Protein | 4e-93 | 42 |
