Gene Information

Name : hsdR2 (LBP_cg0721)
Accession : YP_007986398.1
Strain : Lactobacillus plantarum P-8
Genome accession: NC_021224
Putative virulence/resistance : Unknown
Product : Type I site-specific deoxyribonuclease, HsdR subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 771496 - 773838 bp
Length : 2343 bp
Strand : +
Note : -

DNA sequence :
ATGCGACTGGTTCAGGTATTTGTCATTTCCAATGGCAATGAAACGCGGTATTTTGCGAATGGCGATGGTGAGTTAAATTC
AAACTTCATGTTCTACTGGACGGATGAACATAATAATTGGTTGAATGACTTGGACGCTTTTACGACCACTTTCTTGAGTA
AACCACGGTTACATAGTTTAATCGCAAAATATACGGTGTTCGATAGTAGTGACCATAAAATGTTATTAATGCGGCCTTAT
CAAATATATGCCACTGAGGCAATTATTAAGCAAGCTATCGATCACCCCCATGAAAATGGTTATGTGTGGCACACGACGGG
TTCCGGTAAGACGATTACCTCCTTTAAGGCCAGTCAGTTGTTATTACAAGAAACTGATGCTGAAAAGGTTATCTTCATGA
TTGACCGTGCCGACTTGGATATTCAGACGGTAAAGAATTTTAGTGCCTATCTGCCTGAAACAACTGGGGGCCAGAGTCCC
TTGGATCGGACTGACAATACTGCTGCATTAGTCAAGCAGCTGTCCTCTAATGATAATGGCTTAATCGTGACGACCATTCA
GAAGATGAATAATGCGGTCTCTAATGATCGGTATAAAGATATTCTGACACCGTACCATGACCGCAAAGTGATCTTCATTG
AAGATGAAAGCCATCGTAGCCAGATGGGCGAAATGCGAAAAAACGTGAATCATTGGTTTAAGAATGCCCAACACTTTGGG
TTCACTGGAACCCCGATTTTTCAACAGAATATGGGACCCGATGGGCGGACCACAAAAGATCTGTACGAGAATCAGTTGCA
TCAATACTTGATTCGTGATGCAGTTCGTGATGGTAACGTGCTTGGTTTTTCGATTCAGTATCTGTCGACCTTTGAGGAGA
CTGATCATGACATTACAGACGAACAAGTACCAGGAATTGATACGCAAGAGGTCTATGAGTCCGAGGAGCGATTGACCAAG
ATTGTTGAGCATATCCTGTTGAACCATAGCCACATTACAAAGAATAAGCATTACAATGCAATCTTTACGGTAGCGAATAC
GCGCATGGCTTTAAAGTACTATCAGTTGTTTAGAAAGTTGGATCCTGATCATAATTTGAAGGTCACGACAATCTTTACGT
GGGCTGCCAATGAGGACGACAACGAGGAACACCAAAAACAGGATGATGTCACTTCACGGATGGGATTAGATCAAGTCGTG
AAGGACTATAATCAAATGTACGGTACGGATTTTTCAACGGATAAATTCAAAGATTATTTTGCGGATGTTTCTAAGCGGAT
GCGCGATCATAATGACCAAACGCCGACGGATAATATTGATATTTTGATTGTTGTGAACATGTTCCTAACCGGGTTTGACT
CCAAACGGTTGTCCACACTATACGTGGATAAAAATTTGCAATGGCACGGTTTAATCCAAGCATTTTCTCGAACCAATCGT
GTTGAGGGCAAACAAAAACCATTCGGAAATATTATTGCTTATCGAAATATCAAAAATAAGACGGATGAGGCTGTAGCGTT
GTTTTCAGACGGGGACAGTTCCGGCTTCTTAGCACCAGATTATGATGAATTAAAAGCTGAATTTACTGACAAGATTGGCC
AATTACTGACGGTGACTCCAGATGTCCAGTCAGTGGACGACCTCTATAACCGAGGCGATGACGCACTATATGAGTTTGTG
ATGGCGTTTCGGGCGGTCCTCCGGGTATATAATCGTATTCGCGTGTATGATGATTTTGAATGGGCGCAATATGAACCTGA
ATTTTCGGATCAGCTGATGGAAGCCTTTCGGGGCAAATATTTTACGGCTTATCAAACGATTTACCAACGTAAAACGCAGG
AGCGCGTCTCAATATTAGATGACGTTGACTTTGATATCAGTCTATTGGAGACTGATACCATCAATGTTGACTATATTGTG
AACTTAATCTCAGGCATTGACTTAATGTCGTCGACCGAACGTAAGCAAGATATTCAGAAAATTGAACATTTGTTGGATAA
TGCGACCAATGACCAATTAAAGTCGAAGGTTGAATTGTTGGAACAATTTTTGAATGAAGTTTTGCCAACGCTCGATACAG
ACGATGATATCGGCATGTCGTTGAGTAACTTTATGGCCGAGAGCCAGCGAGCTGCCATTAAGGGCTTTTCACAAGAACAC
CACCTTTCGGAAGACTTCGTTAACGAGCAGATTTCTGACTACAACTTCTACGGTAAGACCAAGGACAAAGAGATTATTGA
CAAGTTAAGTGCTAATGGGCTCGGCTTTCGAGAGAAACGGCAGGCCAAACGCGAGATTAAGGATTTTGTATCGACTATCG
ACCGAAAGTATTCACTAAGCTAG

Protein sequence :
MRLVQVFVISNGNETRYFANGDGELNSNFMFYWTDEHNNWLNDLDAFTTTFLSKPRLHSLIAKYTVFDSSDHKMLLMRPY
QIYATEAIIKQAIDHPHENGYVWHTTGSGKTITSFKASQLLLQETDAEKVIFMIDRADLDIQTVKNFSAYLPETTGGQSP
LDRTDNTAALVKQLSSNDNGLIVTTIQKMNNAVSNDRYKDILTPYHDRKVIFIEDESHRSQMGEMRKNVNHWFKNAQHFG
FTGTPIFQQNMGPDGRTTKDLYENQLHQYLIRDAVRDGNVLGFSIQYLSTFEETDHDITDEQVPGIDTQEVYESEERLTK
IVEHILLNHSHITKNKHYNAIFTVANTRMALKYYQLFRKLDPDHNLKVTTIFTWAANEDDNEEHQKQDDVTSRMGLDQVV
KDYNQMYGTDFSTDKFKDYFADVSKRMRDHNDQTPTDNIDILIVVNMFLTGFDSKRLSTLYVDKNLQWHGLIQAFSRTNR
VEGKQKPFGNIIAYRNIKNKTDEAVALFSDGDSSGFLAPDYDELKAEFTDKIGQLLTVTPDVQSVDDLYNRGDDALYEFV
MAFRAVLRVYNRIRVYDDFEWAQYEPEFSDQLMEAFRGKYFTAYQTIYQRKTQERVSILDDVDFDISLLETDTINVDYIV
NLISGIDLMSSTERKQDIQKIEHLLDNATNDQLKSKVELLEQFLNEVLPTLDTDDDIGMSLSNFMAESQRAAIKGFSQEH
HLSEDFVNEQISDYNFYGKTKDKEIIDKLSANGLGFREKRQAKREIKDFVSTIDRKYSLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0054 YP_300144.1 type I site-specific restriction-modification system restriction subunit Not tested SCC15305cap Protein 1e-164 44