Gene Information

Name : metC1 (LBP_cg0213)
Accession : YP_007985890.1
Strain : Lactobacillus plantarum P-8
Genome accession: NC_021224
Putative virulence/resistance : Resistance
Product : Cystathionine beta-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 229902 - 231062 bp
Length : 1161 bp
Strand : -
Note : -

DNA sequence :
ATGAGGACTTTAACAATGAAATTTGAAACCCAATTAATTCACGGTGGTATCAGTGAGGACGCCACTACTGGCGCGACTTC
GGTACCCATCTACATGGCCTCGACCTTCCGCCAAACAAAAATCGGTCAAAATCAATACGAATATTCACGGACGGGAAATC
CAACCCGGGCCGCCGTCGAAGCATTAATTGCCACCCTCGAACATGGCAGCGCTGGCTTCGCATTTGCTTCTGGCTCCGCT
GCCATTAATACCGTCTTCTCACTATTCTCGGCTGGTGATCACATTATTGTGGGAAATGATATCTACGGTGGCACCTTCCG
CTTGATCGACGCCGTTTTGAAACACTTTGGCATGACTTTTACAGCCGTAGATACGCGTGACTTGGCCGCCGTTGAAGCCG
CAATTACCTCCACAACTAAGGCGATTTATTTGGAAACACCGACGAACCCGTTATTACACATTACGGATATTGCTGCCATT
GCGAAGCTCGCGCAAGCACACGATTTACTGAGTATCATCGACAACACCTTCGCCTCCCCATACGTCCAGAAGCCCCTGGA
TTTAGGCGTTGACATTGTTTTACACAGTGCTTCCAAGTATCTCGGTGGTCACAGTGATGTTATCGGTGGCTTGGTTGTCA
CCAAGACGCCAGCACTTGGCGAAAAAATCGGCTACTTGCAAAATGCCATCGGTAGTATTTTGGCCCCGCAAGAAAGCTGG
CTATTACAACGTGGTATGAAGACTCTGGCATTGCGCATGCAAGCCCACCTGAATAATGCCGCTAAAATCTTTACTTACTT
AAAGTCTCACCCAGCAGTTGCTAAGATTTACTATCCAGGCGATCCTGATAATCCCGATTTTTCGATTGCCAAGCAACAGA
TGAATGGCTTCGGCGCAATGATCTCGTTTGAATTACAACCAGGAATGAACCCCCAGACCTTCGTTGAACATTTACAAGTC
ATCACGCTCGCCGAAAGTCTCGGAGCATTGGAAAGTTTAATTGAAATTCCAGCCTTAATGACTCACGGTGCCATCCCACG
CACAATTCGGCTACAGAATGGCATCAAAGACGAGCTGATTCGCTTATCAGTCGGTGTTGAAGCCAGTGACGATTTGTTAG
CAGACCTTGAGCGCGGGTTCGCTAGCATTCAGGCAGATTAA

Protein sequence :
MRTLTMKFETQLIHGGISEDATTGATSVPIYMASTFRQTKIGQNQYEYSRTGNPTRAAVEALIATLEHGSAGFAFASGSA
AINTVFSLFSAGDHIIVGNDIYGGTFRLIDAVLKHFGMTFTAVDTRDLAAVEAAITSTTKAIYLETPTNPLLHITDIAAI
AKLAQAHDLLSIIDNTFASPYVQKPLDLGVDIVLHSASKYLGGHSDVIGGLVVTKTPALGEKIGYLQNAIGSILAPQESW
LLQRGMKTLALRMQAHLNNAAKIFTYLKSHPAVAKIYYPGDPDNPDFSIAKQQMNGFGAMISFELQPGMNPQTFVEHLQV
ITLAESLGALESLIEIPALMTHGAIPRTIRLQNGIKDELIRLSVGVEASDDLLADLERGFASIQAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 6e-81 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-82 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-66 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metC1 YP_007985890.1 Cystathionine beta-lyase BAC0207 Protein 1e-63 42