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Name : clpC (L336_0048) Accession : YP_007984647.1 Strain : Candidatus Saccharimonas aalborgensis Genome accession: NC_021219 Putative virulence/resistance : Virulence Product : class III stress response-related ATPase, AAA+ superfamily Function : - COG functional category : - COG ID : - EC number : - Position : 54666 - 57131 bp Length : 2466 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12354604, 15529410, 16525504; Product type f : factor DNA sequence : ATGCTACCAGATGATTTTGCCGATTTTATTTCACACCTTACCGACAACGCCAAGTTGAGTGTTCAGCACGCTGATGCGAT TGCTCGGGGAAGCGGGAACGCCTATATAGGCACGGAGCATCTTTTACTAGGAGTTCTGGCACAGGGGAGTAGCACGGGCG CTAAGGTGCTAGCAGACGTTGGCGTGACCCTTCAACGTGCCGAAGATTTGCTCAATATCACCCCTCAGCATGTGGTAGTA CGGACGGGCGCTGTTGGACTATCCGAGACGGCGCTGCTGACACTCAAAATGGGCTGGGAGGTTGCCAAGGATCATAACCA TGATCACCTCGGAACTGAGCATATTCTCTATAGTCTGCTCAAACAAGATAACGCACGGGCAACAGTCCTGCTTCGCGATA TGGAAGTAGACGTCGATGAATTGATCGATGGCCTGGAGGCTCATTTTTCGGAAATGCCAGGGGTAAGTGAGGAAACGACA GCAAAAAATGGCGTCAAACCAATTCGGGGCGGTGCTCTTGCAACCTTTGGAATTGATCTGACAGCAAGTGCACTCGCAGG CGAGCTTGATGCCATGATCGGTCGTGCCAAAGAAGTAGAACGACTTGTCACCATTCTCAGCCGACGCACAAAAAACAATC CCGTGTTGATTGGTGAGCCCGGTGTCGGTAAGACGGCAATCGTAGAGGGGCTGGCACAGCGCATTGTCGCCGAGGATGTC CCGGACCACTTGCTCGACAAACGCGTCATTCAGCTTGATATGGCTGGTATGATTGCCGGCACGAAGTATCGAGGTGAGTT CGAAGATCGCCTTAAAAAAGTTGTTACCGAAATCAAGAAACAAGGCAACGTCATCGTCTTTATTGACGAGTTGCACTTGC TTGTCGGTGCGGGAGCTGCCGAGGGTGCCATGGACGCAGCCAATATCTTGAAACCAGCGCTTGCGCGCGGCGAGCTGCAT ATGATTGGCGCAACCACGCTCGATGAATACCGCAAACATATCGAAAAAGATACGGCACTTGAGCGGCGTTTTCAGACCAT TGTCGTCAAGGAACCGACGTTAGGTGAAACACTTGCTATTCTCAAGGGTCTCAAGGGCTACTACGAGAAACACCACGGCG TCAGCATGAGCGATCAAGCACTTGAGTCGGCGGTCTATATGGCGGATCGCTACGTTGCCGATCGTTTCATGCCCGACAAA GCCATCGATGTCATTGATGAGGCAGCTGCACTTATCAGGGTGAAGCAGGGCCACAAACCAAGTAAACAGCGTGAATATCT AAAGGAACTAAAGGGCCTGAACGAGAAAATGGAAGAAGCAGTTGTTCGGGAGGATTATGAGCGTGCTGCCCTCTATAAGC AGCGAATTAGCCAGATCACCGAGCAGCTAGAAGCGGTCCGCGAAGCACAGGAAGCAAAGAACCCCATTGTTCTTACCGAG CAAAATATTGCACATGCCATCGCGGTCATGACCAATATCCCTGTCGAGAAAGTACAGACGAGTGAGGCGCGTCTCCTTAA GCAGCTCGAATCTCATCTGGGCAAGTATATTATCGGTCAAAAAGATGCCGTGACGAAAGTAGCGCGAGCGATCCGACGAA GTCGCAGCGGCGTGTCGAGTCAAAAGCGCCCGATCGGCAGCTTTGTATTTATGGGACCAACGGGTGTCGGCAAAACGGAA CTTGCACGGGTACTAGCACGTGAGGTGTTTGGGAGTGAGGAAGCGCTGATCAAGATTGATATGAGTGAGTTTGGCGAGAA GCATACGACGAGTCGTCTGATCGGTGCCCCTGCTGGGTACGTTGGTTACGAAGATGGTGGTAAGTTAACTGACAAAATCC GTCGCCAACCCTATAGTGTCGTACTCTTTGATGAAATCGAAAAAGCGCATCCTGATGTGTTTCAGCTCCTCTTGCAACTG CTTGAGGATGGACAATTGACAGATGCTGCTGGTCGCAGTGTCAGTTTTCGTAACACTATCATCATTTTGACAAGCAATCT CGGTGCTGATGCAATGACACGAGAAACGGCACTTGGGTTTCACAATACTACAAGAAAAGAACAGCAGGCGCTTGACCAGC TTCATCTCCGCAATGTCCGTGCCGCACAACATGAGTTAGAAAAATTCATGAGGCCTGAGCTTATCAATCGTCTTGATGGG ATAGTAACATTTCGCGCCCTCACTCGTCAGGAAGTAGGAAAGATATTTGACCTCCTCATTTCAGAATTGCAAGAACGATT GGTTCGTCAAGGAATTGGCCTGGTAGTAAGTCCGGTTGCAAAACGTCACCTTATCGACAAGGGCTACAGTAAGACATTTG GTGCTCGCCCCTTGCGACGCGCTATCGAGGATGAGCTTGAGCACGCCATTGCTGAGGGAATCATTTCCGGGATTTATCAA AAAGGCGCTATACTAGAAGCACGAGTAGAAAAGGGGAATCTCACGCTTGAACAACGAACCGAATAA Protein sequence : MLPDDFADFISHLTDNAKLSVQHADAIARGSGNAYIGTEHLLLGVLAQGSSTGAKVLADVGVTLQRAEDLLNITPQHVVV RTGAVGLSETALLTLKMGWEVAKDHNHDHLGTEHILYSLLKQDNARATVLLRDMEVDVDELIDGLEAHFSEMPGVSEETT AKNGVKPIRGGALATFGIDLTASALAGELDAMIGRAKEVERLVTILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAEDV PDHLLDKRVIQLDMAGMIAGTKYRGEFEDRLKKVVTEIKKQGNVIVFIDELHLLVGAGAAEGAMDAANILKPALARGELH MIGATTLDEYRKHIEKDTALERRFQTIVVKEPTLGETLAILKGLKGYYEKHHGVSMSDQALESAVYMADRYVADRFMPDK AIDVIDEAAALIRVKQGHKPSKQREYLKELKGLNEKMEEAVVREDYERAALYKQRISQITEQLEAVREAQEAKNPIVLTE QNIAHAIAVMTNIPVEKVQTSEARLLKQLESHLGKYIIGQKDAVTKVARAIRRSRSGVSSQKRPIGSFVFMGPTGVGKTE LARVLAREVFGSEEALIKIDMSEFGEKHTTSRLIGAPAGYVGYEDGGKLTDKIRRQPYSVVLFDEIEKAHPDVFQLLLQL LEDGQLTDAAGRSVSFRNTIIILTSNLGADAMTRETALGFHNTTRKEQQALDQLHLRNVRAAQHELEKFMRPELINRLDG IVTFRALTRQEVGKIFDLLISELQERLVRQGIGLVVSPVAKRHLIDKGYSKTFGARPLRRAIEDELEHAIAEGIISGIYQ KGAILEARVEKGNLTLEQRTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-153 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_007984647.1 | class III stress response-related ATPase, AAA+ superfamily | VFG0080 | Protein | 1e-145 | 51 |
| clpC | YP_007984647.1 | class III stress response-related ATPase, AAA+ superfamily | VFG0079 | Protein | 2e-165 | 47 |
