Gene Information

Name : K751_03270 (K751_03270)
Accession : YP_007983634.1
Strain : Helicobacter pylori UM066
Genome accession: NC_021218
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 981067 - 982674 bp
Length : 1608 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTTTAATATTAAAAGGACTTTTTTAATAACGATCATGAGTTTTTTTCTCATCGTTCCTAATTGGTTGAAAGCTATTGA
TTTGCCCATTGTTTCAAATCTCAAAATTTACCAAACAGTTTATTGCATGCTGATACCGAGTTATGTTTTAACCAACAAAA
GTTTTGCAGATATTTTGACAGGCTATACATCTATTGGTGCATCAGGGAGTGGAAAGAGTTCAGGGCAGGGTGTGATCGAA
GCGCTTAGCACACCATTAGCCACAAGTTTAGCCGCTAGCAATCTGGTGAAATATTTGAATACTTTAGGTCCTTTATGGGG
ATCGGCATGGGCAAGTGTTGCTACAGCTATACAAGGTTTTGCTCTAACGCCATCAAGTGGTTGCAATTTTGGTTGGAACG
CGTTGATAAATAAAAACATAGATGTATCCATGGATAGCATGCTAGACAATTTGAGCAACAAGATTCGGAATTTTACCAAA
GGCGGTGTTGAGGACAATGTGAAAGGCAATGTTCTTTTACAAATAATTAGCTCAATAACCGCTCAAGCTTCTACAAATAT
TACAGCTGATGGTTTAATTTGGCTGATTGGCAAAGAATTCACCGCAAATAAACTGCAAAACAACGCTACAGCCATGCTTG
CTTTTGCCGCACTGGAATCTGTTGTCAAAGGAGCGGACGCTGCTGTTCTTCCTGCATATGGTGTAGTCAATCTGCCTGAT
ATTATCATAGGGCAAGGGTCATATCTTGATTTTGTTTCTTACCTAATTTATATTGTTTTTGGGATTTTTGTTTTTATTTC
TTTTATGAAATTGAGAGATATTTCAAATGGCATTCAGATCAACATAGGTTTTGAATACATGCGATTTGTTGGGGGGACAT
TATTCAAAATGGCGATGGTTTCTTTTATCGCCTATGCAGGTTTTGGTTATCTTTATAAAATCTCTTATTCCATTTATTTT
GGTTTAGCAGGCGCTTTTGGGCTGAATCAAGTTCTTTTTTGGGCTTTAGATTTAGTGCTGAATTACACTGTTAATTCAAT
TTTACCTGCGGTAAGAGCTGTTTTTTCTAATGTTGGCAACAACGCTCCTAGTTTGTTACAAGGCTTGCAAGTGGCAGGTA
TTTCTTTATTCGCTATTTTTATGCAAGTAACCATCATTATGAGAATAAGCACTGTTGTTGTGAAACCTTTGATAGCGGGG
GCTTTTAGCGGTATTGTGTTCCCTATTGCAGTATGTTTGATCGTGCTAGATTGGTTCAAAGATTCTATGAAAAACATATT
GATATGGTTTATTAATAATTTATTTATCTTGGTTCTAGCTATTCCTATTTTGCTCTTTGGTGTTTTGGCATTATTAGCAT
TCAATTTGACCATAACGCCCTCTGTTGCTATACAAAACATCAACCAAGGGGGACTGGGTATCGATTCAACTATTGCGAGT
TTGATCACTTTATTTATTTTAAAAGGTTTCATAGAAACGATTATTGAGAGTGTCAATGCGATCGTTAATACCATTTTCAG
CTCTGTATCTATGGATGGTAGCAGAATGGATAGAGAAAGAGATGCCTTAATGGTGGGAAGAGTTGGTGGATCTATGTTTA
AAGGATAA

Protein sequence :
MFNIKRTFLITIMSFFLIVPNWLKAIDLPIVSNLKIYQTVYCMLIPSYVLTNKSFADILTGYTSIGASGSGKSSGQGVIE
ALSTPLATSLAASNLVKYLNTLGPLWGSAWASVATAIQGFALTPSSGCNFGWNALINKNIDVSMDSMLDNLSNKIRNFTK
GGVEDNVKGNVLLQIISSITAQASTNITADGLIWLIGKEFTANKLQNNATAMLAFAALESVVKGADAAVLPAYGVVNLPD
IIIGQGSYLDFVSYLIYIVFGIFVFISFMKLRDISNGIQINIGFEYMRFVGGTLFKMAMVSFIAYAGFGYLYKISYSIYF
GLAGAFGLNQVLFWALDLVLNYTVNSILPAVRAVFSNVGNNAPSLLQGLQVAGISLFAIFMQVTIIMRISTVVVKPLIAG
AFSGIVFPIAVCLIVLDWFKDSMKNILIWFINNLFILVLAIPILLFGVLALLAFNLTITPSVAIQNINQGGLGIDSTIAS
LITLFILKGFIETIIESVNAIVNTIFSSVSMDGSRMDRERDALMVGRVGGSMFKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0529 BAD13917.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagW YP_005777273.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0529 BAD14028.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cag9 AAR03864.1 Cag9 Virulence cag PAI Protein 0.0 99
cagW YP_005774540.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0529 BAD13862.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0529 BAD13945.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagW YP_005775732.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0529 BAD13835.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0529 BAD13890.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagW AGC69796.1 cag pathogenicity island protein W Virulence cag PAI Protein 0.0 99
HP0529 BAD13808.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cag9 AAR03892.1 Cag9 Virulence cag PAI Protein 0.0 99
cagW YP_003728735.1 cag pathogenicity island protein W Virulence cag PAI Protein 0.0 99
HP0529 BAD14000.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cag9 AAR03953.1 Cag9 Virulence cag PAI Protein 0.0 99
HP0529 NP_207325.1 cag pathogenicity island protein (cag9) Virulence cag PAI Protein 0.0 99
HP0529 BAD14054.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cag9 AAR03922.1 Cag9 Virulence cag PAI Protein 0.0 99
orf16 NP_223196.1 cag island protein Virulence cag PAI Protein 0.0 99
HP0529 BAD13781.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagW YP_005779061.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cag-W AAF80200.1 Cag-W Virulence cag PAI Protein 0.0 98
HP0529 BAD13972.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K751_03270 YP_007983634.1 cag pathogenicity island protein VFG0289 Protein 0.0 99