Gene Information

Name : K751_03345 (K751_03345)
Accession : YP_007983649.1
Strain : Helicobacter pylori UM066
Genome accession: NC_021218
Putative virulence/resistance : Virulence
Product : sodium:calcium antiporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 968496 - 969302 bp
Length : 807 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAAACAAAGTTTGCGTGAACAAAAATTATTGAAAATTTTAGAAAATGATGTCTTGACGATTTTGGATAGTTTTTCTAA
TTATCTTTTTGAACTGAGAGAAGAATTGGACTTCATAGAAGAAGAAATGGAGGGCGAAATCACTGAACAAAACCTTACCA
CTCTTTATGATTTTTCTAATTTCTTAGAAGACCATGTCAATGTGTTTTATGAGAATGTTTTAAATATAGATGATGTCAAA
ACAGAACACCTTTATTCAGGTCTCATAGATAGTCTCAATGCTAATCTTCACTTTGTCAAGTCATTTCTCAATAATCAGGA
TTTAGACTTCCGCTTTTTTAAAGAAATAAACGATGGGCAAGATCCCCAAAAAACATTATCAAGATTAATTCCTCTTCAAA
GTGGGAAAAATGACGCAAGCTCGTTTAAAGCAAATAATTCTTTTATCTCATTAGTTTATGTTTATGTTTACTTCATGCTA
GAAACCATCATGCAGTCGTATAGGATTCTCAGATTATTAGAAAAACCTATCAATAACAACATAAGCGAGGATATGCAAAG
CGATATAGAGAATTTTTTTGTTCAAGCGAATTTTTTAGAATACTATGTTCAAAACAAAATATACCCAACCAATCATGCCT
ATGACTTCACGCATTTAATCATGGACTCCATTGTTCCTAATTGGATTCAGGTTGATATGAGCGTTGAAGCTAAAAAGAAA
GAGCTTTTTGAAAAATATTTTCAAAACATTGATGAAGTAACAAACAAAATGCTCGATCAAGAAAATCAAAACAAAAATAG
CGATTGA

Protein sequence :
MKQSLREQKLLKILENDVLTILDSFSNYLFELREELDFIEEEMEGEITEQNLTTLYDFSNFLEDHVNVFYENVLNIDDVK
TEHLYSGLIDSLNANLHFVKSFLNNQDLDFRFFKEINDGQDPQKTLSRLIPLQSGKNDASSFKANNSFISLVYVYVYFML
ETIMQSYRILRLLEKPINNNISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK
ELFEKYFQNIDEVTNKMLDQENQNKNSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0543 BAD13904.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-105 99
cagF YP_005779050.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-105 99
HP0543 BAD13959.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-105 99
HP0543 BAD13795.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-105 99
HP0543 BAD14068.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-104 99
HP0543 BAD13849.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-105 99
HP0543 BAD13876.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-105 99
cagF YP_005774528.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-104 99
HP0543 BAD14014.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-105 99
cagF YP_005777284.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-104 99
HP0543 BAD13822.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-105 99
cagF YP_005775743.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-105 99
cagF AAN34512.1 putative outer membrane protein CagF Virulence cag PAI Protein 1e-103 99
cagF AAN34510.1 putative outer membrane protein CagF Virulence cag PAI Protein 8e-104 98
cag22 AAR03905.1 Cag22 Virulence cag PAI Protein 7e-104 98
cag22 AAR03966.1 Cag22 Virulence cag PAI Protein 5e-104 98
HP0543 BAD14041.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-103 98
cagF AAN34509.1 putative outer membrane protein CagF Virulence cag PAI Protein 8e-102 98
cagF NP_223209.1 cag island protein Virulence cag PAI Protein 6e-104 98
HP0543 BAD13931.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-104 98
cagF AAN34511.1 putative outer membrane protein CagF Virulence cag PAI Protein 1e-102 97
cagF AAN34515.1 putative outer membrane protein CagF Virulence cag PAI Protein 1e-102 97
HP0543 NP_207339.1 cag pathogenicity island protein (cag22) Virulence cag PAI Protein 3e-103 97
cagF AAN34516.1 putative outer membrane protein CagF Virulence cag PAI Protein 7e-103 97
cagF YP_003728721.1 cag pathogenicity island protein F Virulence cag PAI Protein 1e-103 97
cagF AAN34513.1 putative outer membrane protein CagF Virulence cag PAI Protein 5e-103 97
cagF AAN34518.1 putative outer membrane protein CagF Virulence cag PAI Protein 1e-103 97
cag22 AAR03877.1 Cag22 Virulence cag PAI Protein 2e-102 97
cag22 AAR03935.1 Cag22 Virulence cag PAI Protein 8e-102 96
cagF AAC44701.1 CagF Virulence cag PAI Protein 3e-102 96
cagF AAN34517.1 putative outer membrane protein CagF Virulence cag PAI Protein 3e-102 96
cagF AAN34514.1 putative outer membrane protein CagF Virulence cag PAI Protein 2e-102 96
HP0543 BAD13986.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-102 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K751_03345 YP_007983649.1 sodium:calcium antiporter VFG0302 Protein 1e-103 97