Gene Information

Name : K750_04065 (K750_04065)
Accession : YP_007982169.1
Strain : Helicobacter pylori UM037
Genome accession: NC_021217
Putative virulence/resistance : Virulence
Product : sodium:calcium antiporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 797321 - 797749 bp
Length : 429 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAAAACGAATTTTTATAAAATTAAATTACTATTTGCTTGGTGTCTTATCATTGGCATGTTTAACGCTCCGCTTAACGC
TGACCAAAACATTGATATAAAAGATATTAGTCCTGAAGATATGGCACTAAATAGCGTTGGGCTTGTTTCTAGAGATCAAC
TAAAAATAGAGATCCCTAAAGAAACCCTAGAGCAAAAAGTGGCCATACTCAATGACTATAACGATAAGAATGTTAATATC
AAGTTTGACGACATAAGTTTAGGGAGTTTTCAACCTAATGATAATCTAGGTATCAATGCGATGTGGGGCATTCAAAATCT
TCTCATGAGCCAAATGATGGGCGATTACGGTCCAAACAATCCTTTCATGTATGGTTATGCACCAACATACTCAGATTCAT
CGCTTTTACCACCGATCTTAGGGTATTAA

Protein sequence :
MKTNFYKIKLLFAWCLIIGMFNAPLNADQNIDIKDISPEDMALNSVGLVSRDQLKIEIPKETLEQKVAILNDYNDKNVNI
KFDDISLGSFQPNDNLGINAMWGIQNLLMSQMMGDYGPNNPFMYGYAPTYSDSSLLPPILGY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0542 BAD13930.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-60 99
HP0542 NP_207338.1 cag pathogenicity island protein (cag21) Virulence cag PAI Protein 3e-60 98
HP0542 BAD13985.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-60 98
cag21 AAR03934.1 Cag21 Virulence cag PAI Protein 3e-60 98
cag21 AAR03965.1 Cag21 Virulence cag PAI Protein 2e-60 98
cagG AAC44700.1 CagG Virulence cag PAI Protein 1e-60 98
cagG YP_003728722.1 cag pathogenicity island protein G Virulence cag PAI Protein 3e-59 98
cag21 AAR03904.1 Cag21 Virulence cag PAI Protein 1e-60 98
HP0542 BAD14040.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-60 97
cag21 AAR03876.1 Cag21 Virulence cag PAI Protein 2e-60 97
cagG NP_223208.1 cag island protein Virulence cag PAI Protein 9e-60 97
cagG YP_005774529.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-59 97
cagG YP_005777283.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-59 97
HP0542 BAD13848.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-59 97
HP0542 BAD13958.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-59 97
HP0542 BAD13821.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-59 96
HP0542 BAD13875.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-59 96
cagG YP_005775742.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-58 96
HP0542 BAD13903.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-59 96
HP0542 BAD14067.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-59 96
HP0542 BAD14013.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-58 96
cagG YP_005779051.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-59 96
HP0542 BAD13794.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-59 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K750_04065 YP_007982169.1 sodium:calcium antiporter VFG0301 Protein 8e-61 98