Gene Information

Name : K750_04080 (K750_04080)
Accession : YP_007982172.1
Strain : Helicobacter pylori UM037
Genome accession: NC_021217
Putative virulence/resistance : Virulence
Product : sodium:calcium antiporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 794326 - 795039 bp
Length : 714 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAAAACACTCGTGAAAAATACCATATCTTCTTTTTTGCTATTGTCTGTTTTGATGGCAGAAGATATAACAAGCGGCTT
AAAGCAACTGGATAGCACCTACCAAGAGACCAACCAACAAGCGCTCAAAAACCTAGATGAGATTTTTTCAACCACTAGCC
CTAGCGCTAATAATGAAATAGGTCAAGAAGATGCTCTAAACATCAAAAAAGCGGCCATTGCTTTGAGGGGAGATTTAGCG
TTATTGAAAGCCAATTTTGAAGCGAATGAGTTATTTTTCATCTCAGAAGATGTGATTTTCAAGACTTATATGTCTAGCCC
TGAACTTTTATTAACCTATATGAAAATCAATCCCTTAGACCAAAATACTGCTGAGCAACAATGCGGAATATCCGATAAAG
TTTTAGTTCTTTATTGTGAAGGGAAGCTGAAAATCGAGCAAGAAAAACAAAATATAAGAGAGCGTTTAGAAACTTCTCTA
AAGGCGTATCAGAGCAACATTGGAGGTACAGCTTCCTTAATCACTGCTTCACAGACGCTTGTAGAAAGCCTAAAAAATAA
AAATTTCATCAAAGGAATCAGAAAGCTTATGTTAGCTCACAACAAGGTCTTTTTAAATTATTTAGAGGAGTTGGACGCAT
TAGAAAGATCCCTAGAACAAAGTAAGCGACAATACCTACAAGAAAGGCAATCAAGTAAGATCATTGTCAAATGA

Protein sequence : 
MKTLVKNTISSFLLLSVLMAEDITSGLKQLDSTYQETNQQALKNLDEIFSTTSPSANNEIGQEDALNIKKAAIALRGDLA
LLKANFEANELFFISEDVIFKTYMSSPELLLTYMKINPLDQNTAEQQCGISDKVLVLYCEGKLKIEQEKQNIRERLETSL
KAYQSNIGGTASLITASQTLVESLKNKNFIKGIRKLMLAHNKVFLNYLEELDALERSLEQSKRQYLQERQSSKIIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0539 BAD14037.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-103 99
cag18 AAR03873.1 Cag18 Virulence cag PAI Protein 1e-103 99
HP0539 NP_207335.1 cag pathogenicity island protein (cag18) Virulence cag PAI Protein 1e-103 99
cagL AAC44697.1 CagL Virulence cag PAI Protein 9e-104 99
cagL AGC69801.1 cag pathogenicity island protein L Virulence cag PAI Protein 8e-103 98
cagL YP_005775739.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-102 98
cagL YP_003728725.1 cag pathogenicity island protein L Virulence cag PAI Protein 1e-102 98
HP0539 BAD13872.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-102 98
cag18 AAR03931.1 Cag18 Virulence cag PAI Protein 4e-102 98
HP0539 BAD13982.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-102 98
cag18 AAR03901.1 Cag18 Virulence cag PAI Protein 3e-102 98
cag18 AAR03962.1 Cag18 Virulence cag PAI Protein 1e-102 98
cagL NP_223205.1 cag island protein Virulence cag PAI Protein 7e-102 98
HP0539 BAD13818.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-101 96
HP0539 BAD13791.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-101 96
HP0539 BAD13927.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-101 96
cagL YP_005774532.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-101 96
HP0539 BAD13845.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-100 96
cagL YP_005777280.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-101 96
HP0539 BAD13955.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-101 96
cagL YP_005779054.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-101 96
HP0539 BAD14010.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-101 96
HP0539 BAD14064.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-99 95
HP0539 BAD13900.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-100 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K750_04080 YP_007982172.1 sodium:calcium antiporter VFG0298 Protein 6e-104 99