Gene Information

Name : K750_04090 (K750_04090)
Accession : YP_007982174.1
Strain : Helicobacter pylori UM037
Genome accession: NC_021217
Putative virulence/resistance : Virulence
Product : sodium:calcium antiporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 792179 - 793309 bp
Length : 1131 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGCTTGCAAAAATTGTTTTTAGCTCATTGGTTGCGTTTGGAGTTTTGTCGGCTAATGTGGAGCAGTTTGGTTCATTTTT
CAACGAGATAAAAAAAGAACAAGAAGAAGTGGCTGCAAAAGAAGACGCTCTTAAGGCTCGCAAGAAGCTCTTAAACAATA
CTCATGATTTCTTAGAAGACTTGATTTTTAGAAAACAAAAAATCAAAGAGCTTATGGATCATAGAGCTAAAGTTCTTTCA
GACTTAGAAAACAAATACAAAAAAGAAAAAGAGGCTTTAGAGAAAGAGACAAGAGGTAAAATCCTTACTGCTAAGTCAAA
GGCTTATGGTGATCTAGAGCAAGCCTTAAAAGATAACCCTCTCTATAAGAAACTTCTTCCTAACCCTTATGCCTATGTTT
TAAACCAAGAAACATTCACGCAAGAGGATAAGGAGCGTTTGAGTTATTACTACCCCCAAGTGAAAACGAGCAGTATTTTT
AAAAAAACTACCGCTACCACTAAAGATAAGGCTCAGGCTTTGCTTCAAATGGGTGTGTTTTCTTTAGATGAAGAACAAAA
CAAAAAAGCGAGCCGATTAGCTTTATCTTACAAGCAAGCGATTGAAGAATATTCCAATAACATTTCTAATCTGTTGAGCA
GAAAAGAATTGGATAATATAGATTATTACTTGCAGCTTGAAAGAAACAAATTTGACTCCAAAGCAAAAGATATTGCTCAA
AAAGCTACCAACACGCTTATTTTTAACTCGGAACGCTTGGCGTTTAGCATGGCGATTGATAAGATCAATGAGAAATACTT
AAGGGGCTATGAGGCTTTTTCTAACTTGTTGAAAAATGTCAAAGATGATGTGGAATTGAATACTCTGACTAAAAATTTTA
CCAATCAAAAATTGAGTTTCGCACAAAAACAAAAATTGTGTTTGTTGGTTTTAGACAGCTTCAATTTTGATACCCAATCC
AAAAAATCTATATTAAAAAAGACTAATGAATACAATATTTTCGTAGATAGCGATCCTATGATGAGCGACAAAACAACTAT
GCAAAAAGAACACTACAAGATATTTAATTTCTTCAAAACAGTGGTTTCTGCATACCGAAACAATGTTGCCAAGAATAATC
CCTTTGAATAG

Protein sequence : 
MLAKIVFSSLVAFGVLSANVEQFGSFFNEIKKEQEEVAAKEDALKARKKLLNNTHDFLEDLIFRKQKIKELMDHRAKVLS
DLENKYKKEKEALEKETRGKILTAKSKAYGDLEQALKDNPLYKKLLPNPYAYVLNQETFTQEDKERLSYYYPQVKTSSIF
KKTTATTKDKAQALLQMGVFSLDEEQNKKASRLALSYKQAIEEYSNNISNLLSRKELDNIDYYLQLERNKFDSKAKDIAQ
KATNTLIFNSERLAFSMAIDKINEKYLRGYEAFSNLLKNVKDDVELNTLTKNFTNQKLSFAQKQKLCLLVLDSFNFDTQS
KKSILKKTNEYNIFVDSDPMMSDKTTMQKEHYKIFNFFKTVVSAYRNNVAKNNPFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cagM NP_223203.1 cag island protein Virulence cag PAI Protein 5e-150 99
HP0537 BAD13898.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-150 99
cag16 AAR03960.1 Cag16 Virulence cag PAI Protein 3e-149 99
cagM YP_005775737.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-150 99
HP0537 BAD13980.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-151 99
HP0537 BAD13925.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-150 99
cagM YP_005779056.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-150 99
cag16 AAR03929.1 Cag16 Virulence cag PAI Protein 2e-151 99
HP0537 BAD13870.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-150 99
cagM YP_005774534.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-150 99
cag16 AAR03871.1 Cag16 Virulence cag PAI Protein 9e-152 99
HP0537 BAD13789.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-150 99
cagM YP_003728727.1 cag pathogenicity island protein M Virulence cag PAI Protein 1e-151 99
cagM AGC69800.1 cag pathogenicity island protein M Virulence cag PAI Protein 9e-152 99
HP0537 NP_207333.1 cag pathogenicity island protein (cag16) Virulence cag PAI Protein 1e-151 99
cagM AAC44695.1 CagM Virulence cag PAI Protein 6e-152 99
HP0537 BAD13843.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-150 99
cag16 AAR03899.1 Cag16 Virulence cag PAI Protein 6e-152 99
HP0537 BAD14035.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-150 99
HP0537 BAD13953.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-150 99
HP0537 BAD13816.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-148 98
cagM YP_005777278.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-149 98
HP0537 BAD14008.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-147 97
HP0537 BAD14062.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-141 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K750_04090 YP_007982174.1 sodium:calcium antiporter VFG0296 Protein 5e-152 99