Gene Information

Name : K750_04105 (K750_04105)
Accession : YP_007982177.1
Strain : Helicobacter pylori UM037
Genome accession: NC_021217
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 789561 - 790160 bp
Length : 600 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAGTAATAACATGCGAAAACTCTTCTCAATGATTGCTGACTCAAAAGATAAGAAAGAAAAACTTATTGAGAGTTTGCA
GGAGAACGAACTTTTAAACACTGATGAAAAAAAGAAAATCACAGATCAAATAAAAACCATGCATGATTTTTTCAAGCAGA
TGCATACAAACAAGGGAGCGTTAGATAAGGTTCTAAGAAATTACATGAAAGATTATCGCGCTGTTATCAAAAGCATTGGT
GTTGGTAAGTTTAAAAAGGTTTATCGATTGCTTGAGAGTGAGACTATGAATCTGTTGCATGCGATTGCAGAGAATCCTAA
TTTCTTATTCTCTAAATTTGATCGATCAATTCTTGGAATATTTCTGCCTTTCTTCAGTAAGCCCATCATGTTCAAGATGA
GTATTAGAGAAATGGACTCGCAAATAGAATTGTATGGCACTAAGCTCCCACTATTGAAATTGTTTGTGATGACAGATGAA
GAAATAAATTTCTACGCTAATCTAAAAACCATTGGACAATATAACGACTATGTTAGGGATTTGCTGATGAAATTTGATCT
TGAAAAATACATGGAAGAAAAAGGAGTGCAAAATGCTTGA

Protein sequence :
MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKITDQIKTMHDFFKQMHTNKGALDKVLRNYMKDYRAVIKSIG
VGKFKKVYRLLESETMNLLHAIAENPNFLFSKFDRSILGIFLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDE
EINFYANLKTIGQYNDYVRDLLMKFDLEKYMEEKGVQNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0534 BAD14032.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-88 98
HP0534 BAD13840.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-87 97
cagS NP_223200.1 cag island protein Virulence cag PAI Protein 2e-86 97
HP0534 BAD13950.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-87 97
HP0534 BAD13813.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-86 97
cagS YP_005774536.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-87 97
cag13 AAR03868.1 Cag13 Virulence cag PAI Protein 1e-86 97
cagS YP_005779057.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-87 97
HP0534 BAD14005.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-87 97
HP0534 BAD14059.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-87 97
HP0534 NP_207330.1 cag pathogenicity island protein (cag13) Virulence cag PAI Protein 3e-85 97
HP0534 BAD13786.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-87 97
HP0534 BAD13895.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-87 97
cagS AAF80204.1 CagS Virulence cag PAI Protein 5e-87 97
HP0534 BAD13922.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-86 96
HP0534 BAD13977.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-85 96
HP0534 BAD13867.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-86 96
cagS YP_005775736.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-86 96
cag13 AAR03957.1 Cag13 Virulence cag PAI Protein 5e-86 96
cagS YP_005777277.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-86 96
cag13 AAR03896.1 Cag13 Virulence cag PAI Protein 5e-86 96
cag13 AAR03926.1 Cag13 Virulence cag PAI Protein 2e-85 95
cagS YP_003728731.1 cag pathogenicity island protein S Virulence cag PAI Protein 7e-86 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K750_04105 YP_007982177.1 cag pathogenicity island protein VFG0293 Protein 8e-86 97