Gene Information

Name : K750_04125 (K750_04125)
Accession : YP_007982181.1
Strain : Helicobacter pylori UM037
Genome accession: NC_021217
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 784784 - 786385 bp
Length : 1602 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGATTAAAAGGACTTTTTTAATAACGATCATGAGTTTTTTTCTCATTGTTCCTAATTGGTTGAAAGCTATTGATTTGCC
CATTGTTTCAAATCTCAAAATTTACCAAACAGTTTATTGCATGCTGATACCGAGTTATGTTTTAACCAACAAAAGTTTTG
CAGATATTTTGACAGGCTATACATCTATTGGTGCATCAGGGAGTGGAAAGAGTTCAGGGCAGGGTGTGATCGAAGCGCTT
AGCACACCATTAGCCACAAGTTTAGCCGCTAGCAATCTGGTGAAATATTTGAATACTTTAGGTCCTTTATGGGGATCGGC
GTGGGCAAGTGTTGCTACAGCTATACAAGGTTTTGCTCTAACGCCATCAAGTGGCTGTAATTTTGGTTGGAACGCATTGA
TAAATAAAAACATAGATGTATCCATGGATAGCGTGCTAGACAATTTGAGCAACAAGATTCAGAATTTTACCAAAGGCGGT
GTTGAGGACAATGTGAAAGGCAATATTCTTTTGCAAATAATTGGCTCAATAACCGCTCAAGCTTCTACGAATATTACAGC
TGATGGTTTAATTTGGCTGATTGGTAAAGAATTCACTGCAAATAAACTGCAAAACAACACTACAGCCATGCTTGCTTTTG
CCGCATTAGAATCTGTTGTCAAAGGAGCGGACGCTGCTGTTCTTCCTGCATATGGTGTAGTCAATCTGCCTGATATTATC
ATAGGGCAAGGGTCATATCTTGATTTTGTTTCTTACCTGATTTATATTGTTTTTGGGATTTTTGTTTTTATTTCTTTTAT
GAAATTGAGAGATATTTCAAGTAACATTCAGATTAACATAGGTTTTGAATACATGCGATTTATTGGGGGGACATTATTCA
AAATGGCGATGGTCTCTTTTATCGCCTATGCAGGTTTTGGTTATCTTTATAAAATCTCTTATTCTATTTATTTTGGTTTA
GCAGGCGCTTTTGGGCTGAATCAAGTTCTTTTTTGGGCTTTAGATTTAGTGCTGAATTACACTGTTAATTCAATTTTACC
TGCGGTAAGAGCTGTTTTTTCTAATGTTGGCAACAACGCTCCTAGTTTGTTACAAGGCTTGCAAGTGGCAGGTATTTCTT
TATTCGCTATTTTTATGCAAGTAACTATCATTATGAGAATAAGCACTGTGGTTGTGAAACCTTTGATAGCGGGGGCTTTT
AGCGGTATTGTGTTCCCTATTGCGGTATGTTTGATTGTGCTAGATTGGTTCAAAGATTCTATGAAAAACATATTGATATG
GTTTATTAATAATTTGTTTATCTTGGTTCTAGCTATTCCTATTTTGCTCTTTGGTGTTTTGGCATTATTGGCATTCAATT
TGACCATAACGCCCTCTGTTGCTATACAAAACATCAATCAAGGGGGACTGGGTATCGATTCAACTATTGCGAGTTTGATC
ACTTTATTTATTTTAAAGGGTTTCATAGAGACGATTATTGAGAGTGTCAATGCGATCGTTAATACCATTTTCAGCTCTGT
CTCTATAGATGGCAGCAGAATGGATAGAGAAAGAGATGCCTTGATGGTAGGAAGAGTTGGTGGATCTATGTTTAAAGGAT
AA

Protein sequence :
MIKRTFLITIMSFFLIVPNWLKAIDLPIVSNLKIYQTVYCMLIPSYVLTNKSFADILTGYTSIGASGSGKSSGQGVIEAL
STPLATSLAASNLVKYLNTLGPLWGSAWASVATAIQGFALTPSSGCNFGWNALINKNIDVSMDSVLDNLSNKIQNFTKGG
VEDNVKGNILLQIIGSITAQASTNITADGLIWLIGKEFTANKLQNNTTAMLAFAALESVVKGADAAVLPAYGVVNLPDII
IGQGSYLDFVSYLIYIVFGIFVFISFMKLRDISSNIQINIGFEYMRFIGGTLFKMAMVSFIAYAGFGYLYKISYSIYFGL
AGAFGLNQVLFWALDLVLNYTVNSILPAVRAVFSNVGNNAPSLLQGLQVAGISLFAIFMQVTIIMRISTVVVKPLIAGAF
SGIVFPIAVCLIVLDWFKDSMKNILIWFINNLFILVLAIPILLFGVLALLAFNLTITPSVAIQNINQGGLGIDSTIASLI
TLFILKGFIETIIESVNAIVNTIFSSVSIDGSRMDRERDALMVGRVGGSMFKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cagW AGC69796.1 cag pathogenicity island protein W Virulence cag PAI Protein 0.0 99
cag9 AAR03892.1 Cag9 Virulence cag PAI Protein 0.0 99
cagW YP_003728735.1 cag pathogenicity island protein W Virulence cag PAI Protein 0.0 99
HP0529 BAD13835.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagW YP_005779061.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagW YP_005777273.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0529 BAD13862.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0529 BAD13781.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagW YP_005774540.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0529 BAD13890.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cag9 AAR03922.1 Cag9 Virulence cag PAI Protein 0.0 99
HP0529 NP_207325.1 cag pathogenicity island protein (cag9) Virulence cag PAI Protein 0.0 99
HP0529 BAD13972.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
orf16 NP_223196.1 cag island protein Virulence cag PAI Protein 0.0 99
cag-W AAF80200.1 Cag-W Virulence cag PAI Protein 0.0 99
HP0529 BAD13917.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0529 BAD14028.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagW YP_005775732.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cag9 AAR03864.1 Cag9 Virulence cag PAI Protein 0.0 99
cag9 AAR03953.1 Cag9 Virulence cag PAI Protein 0.0 99
HP0529 BAD13808.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 98
HP0529 BAD14054.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 98
HP0529 BAD14000.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 98
HP0529 BAD13945.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K750_04125 YP_007982181.1 cag pathogenicity island protein VFG0289 Protein 0.0 99