Gene Information

Name : K750_04130 (K750_04130)
Accession : YP_007982182.1
Strain : Helicobacter pylori UM037
Genome accession: NC_021217
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 783166 - 784731 bp
Length : 1566 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGGGCAGGCATTTTTTAAAAAAATTGTTGGCTGTTTCTGTCTTGGTTATTTATTTTTATCTAGCGTAATAGAAGCAGC
ACCTGACATTAAAAATTTTAATCGTGGTAGGGTGAAAGTGGTGAATAAGAAGATTGCTTATTTGGGCGATGAAAAACCTA
TTACGATTTGGACTTCATTAGACAATGTTACTGTGATCCAACTTGAAAAAGATGAAACTATTTCTTACATCACAACAGGT
TTCAATAAAGGTTGGAGTATTGTGCCTAATTCTAATCATATATTCATTCAACCTAAATCGGTAAAAAGTAATCTCATGTT
TGAAAAAGAAGCAGTGAATTTTGCCCTAATGACAAGAGATTACCAAGAATTTTTAAAAACAAAAAAACTTATCGTAGATG
CGCCTGACCCTAAAGAATTAGAAGAACAAAAAAAAGCTCTAGAAAAAGAAAAAGAAGCTAAAGAACAGGCGCAAAAAGCG
CAAAAAGATAAAAGAGAAAAAAGAAAGGAAGAGCGTGCAAAAAATAGAGCCAATTTAGAAAATCTCACTAACGCTATGAG
TAACCCACAAAATTTGAGCAATAACAAAAATCTTAGCGAATTTATCAAGCAACAACGAGAAAATGAATTAGACCAAATGG
AACGACTAGAGGACATGCAAGAACAGGCTCAAGCTAATGCGCTCAAACAAATTGAAGAACTCAACAAGAAACAAGCTGAA
GAGACAATCAAGCAAAGAGCCAAAGATAAAATCAGTATTAAGACAGATAAGCCTCAAAAAAGCCCTGAGGATAACTCCAT
AGAATTATCTCCTAGCGATAGCGCTTGGAGAACTAATCTTGTTGTGCGGACTAATAAAGCCTTGTATCAATTCATTTTGA
GAATAGCTCAAAAAGACAATTTTGCTTCGGCGTATCTAACAGTCAAACTAGAATACCCACAAAGACACGAAGTTTCTAGC
GTTATTGAAGAGGAGCTAAAAAAGAGAGAAGAAGCAAAGAGGCAGAAAGAATTGATCAAGCAAGAAAATCTTAACACCAC
AGCCTACATCAATAGAGTAATGATGGCGAGCAATGAACAGATTATCAACAAAGAAAAAATAAGAGAAGAAAAACAAAAAA
TTATCTTAGATCAAGCAAAGGCGCTAGAGACTCAATATGTGCATAATGCCTTAAAAAGAAACCCCGTGCCTAGAAACTAC
AATTACTACCAAGCACCTGAAAAACGCTCTAAACATATTATGCCCTCTGAAATTTTTGATGATGGCACATTCACTTATTT
TGGTTTCAAAAACATCACTCTCCAACCTGCTATTTTTGTGGTTCAACCTGATGGGAAATTGAGCATGACTGATGCTGCCA
TTGATCCTAACATGACCAATTTAGGATTGAGATGGTATAGAGTTAATGAAATTGCAGAAAAATTTAAGCTCATTAAAGAC
AAAGCCCTTGTAACAGTAATCAATAAAGGCTATGGGAAAAATCCATTGACAAAAAATTACAATATCAAAAACTATGGTGA
ATTGGAGCGCGTGATTAAAAAGCTCCCTCTTGTCAGAGATAAATAA

Protein sequence :
MGQAFFKKIVGCFCLGYLFLSSVIEAAPDIKNFNRGRVKVVNKKIAYLGDEKPITIWTSLDNVTVIQLEKDETISYITTG
FNKGWSIVPNSNHIFIQPKSVKSNLMFEKEAVNFALMTRDYQEFLKTKKLIVDAPDPKELEEQKKALEKEKEAKEQAQKA
QKDKREKRKEERAKNRANLENLTNAMSNPQNLSNNKNLSEFIKQQRENELDQMERLEDMQEQAQANALKQIEELNKKQAE
ETIKQRAKDKISIKTDKPQKSPEDNSIELSPSDSAWRTNLVVRTNKALYQFILRIAQKDNFASAYLTVKLEYPQRHEVSS
VIEEELKKREEAKRQKELIKQENLNTTAYINRVMMASNEQIINKEKIREEKQKIILDQAKALETQYVHNALKRNPVPRNY
NYYQAPEKRSKHIMPSEIFDDGTFTYFGFKNITLQPAIFVVQPDGKLSMTDAAIDPNMTNLGLRWYRVNEIAEKFKLIKD
KALVTVINKGYGKNPLTKNYNIKNYGELERVIKKLPLVRDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cag8 AAR03863.1 Cag8 Virulence cag PAI Protein 0.0 99
cagX YP_005777272.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0528 BAD13861.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0528 BAD14053.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagX YP_003728736.1 cag pathogenicity island protein X Virulence cag PAI Protein 0.0 99
cag8 AAR03952.1 Cag8 Virulence cag PAI Protein 0.0 99
HP0528 BAD13971.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagX YP_005779062.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0528 BAD13834.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagX AGC69795.1 cag pathogenicity island protein X Virulence cag PAI Protein 0.0 99
HP0528 NP_207324.1 cag pathogenicity island protein (cag8) Virulence cag PAI Protein 0.0 99
HP0528 BAD13807.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0528 BAD13916.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagX YP_005775731.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0528 BAD13889.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0528 BAD13999.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagX YP_005774541.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cag8 AAR03921.1 Cag8 Virulence cag PAI Protein 0.0 99
cag8 AAR03891.1 Cag8 Virulence cag PAI Protein 0.0 99
cag-X AAF80199.1 Cag-X Virulence cag PAI Protein 0.0 99
HP0528 BAD13780.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 98
HP0528 BAD13944.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 98
HP0528 BAD14027.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 98
orf15 NP_223195.1 cag island protein Virulence cag PAI Protein 0.0 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K750_04130 YP_007982182.1 hypothetical protein VFG0288 Protein 0.0 99