Gene Information

Name : K750_04170 (K750_04170)
Accession : YP_007982190.1
Strain : Helicobacter pylori UM037
Genome accession: NC_021217
Putative virulence/resistance : Virulence
Product : sodium:calcium antiporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 770959 - 772404 bp
Length : 1446 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGTTTAGAAAACTAGCAACCGCTGTATCGCTCATAGGCTTACTAACCTCTAACACTCTTTATACTAAAGAAATAAGTGA
AGCCGATAAGGTCATTAAGGCCACTAAAGAAACTAAAGAGACCAAGAAAGAAGCTAAACGACTCAAAAAAGAAGCTAGAC
AGCGCCAACAGATCCCTGATCATAAGAAACCTCAATATGCCTCTGTTGATGACACAAAAACTCAAGCGCTTTTTGATATA
TACGACACCTTGAACGTGAATGATAAAAGCTTTGGGGATTGGTTTGGTAATAGCGCTTTGAAAGACAAAACCTATCTATA
CGCTATGGATCTATTGGATTACAACAACTATTTATCCATAGAAAACCCCATTATCAAAACAAGAGCGATGGGGACCTATG
CAGATCTCATCATCATCACAGGCTCACTAGAACAAGTCAATGGGTATTACAACATTCTCAAAGCGCTCAACAAACGAAAC
GCTAAGTTTGTGTTAAAAATCAACGAGAACATGCCTTATGCCCAAGCGACTTTTTTGAGAGTGCCAAAAAGAAGCGATCC
CAATGCCCACACGCTTGATAAGGGAGCGTCAATTGATGAGAATAAGCTTTTTGAACAACAAAAGAAAATGTATTTCAACT
ACGCCAACGATGTGATCTGCAGACCCGATGATGAAGTGTGTTCGCCCCTAAGAGATGAGATGGTAGCTATGCCCACTAAC
GATAGCGTTACCCAAAAACCCAATATCATTGCTCCTTATAGTTTATACAGGCTAAAAGAGACAAATAACGCCAATGAGAC
CCAACCATCACCTTATGCCACCCAAACCGCTCCTGAAAACAGCAAAGAGAAGCTCATAGAAGAGCTAATCGCCAACTCCC
AACTCATAGCCAATGAAGAAGAGAGGGAAAAGAAACTCTTAGCAGAAAAAGAAAAACAAGAGGCTGAATTGGCTAAATAC
AAGCTCAAAGACTTAGAAAATCAAAAGAAACTAAAAGCTTTAGAAGCAGAGTTGAAAAAGAAAAACGCTAAGAAACCTAG
AGTAGTGGAAGTGCCTATTCCTCATCAAACAAGTGATTCTGATGAAACAATGAGAGTTATCAAAGAAAAAGAAAACTATA
ATGGGTTATTAGTGGATAAAGAGACCACGATCAAAAGAAGCTATGAGGGGACTTTGATCAGTGAAAATTCTTACAGCAAA
AAAACACCCATCAACCTTGAGGACTTGAGGAGCTTAGAAGAAGAAATTAAGAGCTACTATGTCAAGTCTAATGGCTTGTG
TTACTCTAATGGCATTAACCTCTATGTAAAAATCAAAAATGATCCCTACAAAGAGGGAATGCTGTGTGGTTATGAGAGCG
TTCAAAATCTGCTCTCACCTCTAAAGGACAAGCTCAAATACGACAAGCAGAAGTTACAAAAAGCGTTACTGAAAGATTCA
AAGTAA

Protein sequence : 
MFRKLATAVSLIGLLTSNTLYTKEISEADKVIKATKETKETKKEAKRLKKEARQRQQIPDHKKPQYASVDDTKTQALFDI
YDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSIENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRN
AKFVLKINENMPYAQATFLRVPKRSDPNAHTLDKGASIDENKLFEQQKKMYFNYANDVICRPDDEVCSPLRDEMVAMPTN
DSVTQKPNIIAPYSLYRLKETNNANETQPSPYATQTAPENSKEKLIEELIANSQLIANEEEREKKLLAEKEKQEAELAKY
KLKDLENQKKLKALEAELKKKNAKKPRVVEVPIPHQTSDSDETMRVIKEKENYNGLLVDKETTIKRSYEGTLISENSYSK
KTPINLEDLRSLEEEIKSYYVKSNGLCYSNGINLYVKIKNDPYKEGMLCGYESVQNLLSPLKDKLKYDKQKLQKALLKDS
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cag3 AAR03914.1 Cag3 Virulence cag PAI Protein 1e-164 97
HP0522 NP_207318.1 cag pathogenicity island protein (cag3) Virulence cag PAI Protein 5e-165 97
cag3 AGC69793.1 cag pathogenicity island protein 3 Virulence cag PAI Protein 1e-164 97
cag3 AAR03854.1 Cag3 Virulence cag PAI Protein 2e-164 97
cag3 YP_003728744.1 cag pathogenicity island protein delta Virulence cag PAI Protein 2e-164 97
cag3 AAR03945.1 Cag3 Virulence cag PAI Protein 8e-164 97
HP0522 BAD13774.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-163 96
cag-delta AAF80193.1 Cag-delta Virulence cag PAI Protein 1e-163 96
cag3 YP_005779068.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-163 96
HP0522 BAD14021.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-164 96
orf8 NP_223189.1 cag island protein Virulence cag PAI Protein 1e-163 96
HP0522 BAD13883.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-162 96
cag3 AAR03885.1 Cag3 Virulence cag PAI Protein 2e-161 96
HP0521 BAD13993.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-162 96
HP0521 BAD13965.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-162 96
HP0522 BAD13801.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-162 95
HP0522 BAD13938.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-162 95
HP0522 BAD13855.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-161 95
HP0522 BAD14047.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-162 95
cag3 YP_005775725.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-161 95
HP0522 BAD13910.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-161 95
cag3 YP_005777266.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-162 95
cag3 YP_005774547.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-162 95
HP0522 BAD13828.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-162 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K750_04170 YP_007982190.1 sodium:calcium antiporter VFG0282 Protein 2e-165 97