|
Name : K750_04580 (K750_04580) Accession : YP_007982265.1 Strain : Helicobacter pylori UM037 Genome accession: NC_021217 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : - Position : 678717 - 680234 bp Length : 1518 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGGTTAATAAAGATGTGAAACAAACCACTGCTTTTGGCGCTCCCGTTTGGGATGACAACAATGTGATTACGGCCGGCCC TAGAGGTCCTGTTTTATTACAAAGCACTTGGTTTTTGGAAAAGTTAGCGGCGTTTGACAGAGAAAGGATCCCTGAAAGGG TGGTGCATGCTAAAGGAAGCGGGGCTTATGGCACTTTCACTGTGACTAAAGACATCACTAAATACACTAAAGCGAAAATT TTCTCTAAAGTGGGCAAAAAAACAGAATGTTTTTTCAGATTTTCTACTGTGGCTGGTGAAAGAGGCAGTGCGGATGCAGT GAGAGACCCTAGAGGTTTTGCGATGAAGTATTACACTGAAGAAGGTAACTGGGATTTAGTAGGGAACAATACGCCTGTTT TCTTTATCCGTGATGCGATCAAATTCCCTGATTTCATCCACACTCAAAAACGAGACCCTCAAACCAATTTGCCTAACCAC GACATGGTATGGGATTTTTGGAGTAATGTTCCTGAAAGCTTATACCAAGTAACATGGGTTATGAGCGATAGAGGGATCCC TAAATCTTTCCGCCACATGGATGGTTTTGGCAGCCACACTTTCAGTCTTATCAACGCTAAAGGCGAACGCTTTTGGGTGA AATTCCACTTCCACACCATGCAAGGCGTTAAGCATTTGACTAACGAAGAAGCTGCAGAAATCAGAAAGCATGATCCTGAT TCCAATCAAAGGGATTTATTCGATGCGATCGCTAGAGGGGATTACCCAAAATGGAAATTGAGCATTCAAGTGATGCCAGA AGAAGATGCTAAGAAGTATCGATTCCATCCGTTTGATGTAACTAAAATTTGGTATCTCCAAGATTATCCATTAATGGAAG TGGGCATTGTAGAGTTGAATAAAAATCCTGAAAACTATTTCGCAGAAGTGGAGCAAGCGGCATTCACTCCGGCTAATGTC GTTCCTGGAATTGGCTATAGCCCTGATAGGATGTTACAAGGGCGCTTGTTCTCTTACGGAGACACACACCGCTACCGCTT AGGGGTTAATTATCCTCAAATACCGGTCAATAAACCAAGATGCCCATTCCACTCTTCTAGCAGAGATGGTTACATGCAAA ATGGGTATTACGGCTCTTTACAAAACTATACGCCTAGCTCATTGCCTGGCTATAAAGAAGATAAGAGTGCGAGAGATCCT AAGTTCAACTTAGCTCATATTGAGAAAGAGTTTGAAGTGTGGAATTGGGATTACAGGGCTGATGATAGCGATTACTACAC CCAACCAGGTGATTACTACCGCTCATTGCCAGCTGATGAAAGAGAAAGGTTGCATGACACTATTGGAGAATCTTTAGCTC ATGTTACCCATAAGGAAATTGTGGATAAACAATTGGAGCATTTCAAGAAAGCTGACCCCAAATACGCTGAGGGAGTTAAA AAAGCTCTTGAAAAACACCAAAAAATGATGAAAGACATGCATGGAAAAGACATGCACCACATGAAAAAGAAAAAGTAA Protein sequence : MVNKDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKI FSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNH DMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEIRKHDPD SNQRDLFDAIARGDYPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFTPANV VPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDP KFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADERERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVK KALEKHQKMMKDMHGKDMHHMKKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 2e-135 | 60 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 4e-92 | 51 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 8e-90 | 46 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 8e-90 | 46 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 8e-90 | 46 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 8e-90 | 46 |
