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Name : K750_00885 (K750_00885) Accession : YP_007981541.1 Strain : Helicobacter pylori UM037 Genome accession: NC_021217 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1423219 - 1424466 bp Length : 1248 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGATTGATAGAAAACTTTTATTGCAAGATTTTGATAAGGTGGCTCTTTCTTTAAAAAAGCGTAATAATGCGATGGATGA TGAGTTGGAGCGTTTGCGCGAAGTCATCACGCATTATAAAAAGCAACTCATTGAATTGGAAGGCTTGCAAGCCTTTCAAA ACAAGGTTTCTAAAGAATTTGGCATCAAAATGGCTCAAAAAGCGGATGCAAGCGATCTCAAAAAAGAGCTAGAAAACAAT AAAATCAAACTGAATGAGCTTTCTAAAAGCGTGGGCGAATTGGAGCAACAAATTGATTTGAAGCTTTCCATAATCCCTAA TCTGGTGGATGAAAAAACCCCTTTAGGTGCAAGCGAAGAAGACAACATAGAAATTAAAAAAATCTTAACCCCAAGGGTTT TTAATTTCAAACCCAAAGAGCATTTTGAACTCGCTCAAAAAAACGGCTGGATTGATTTTGAAAGCGGCGTGAAACTCGCC AAAAGCCGTTTTTCTGTTATCAGGGGTTTTGGGGCGAAAATTTATCGCGCGCTCATTCATTTAATGCTAGATTTTAATGA AAAAAACGGCTTTGAAATCATTTACACGCCGGCGTTAGTGAATGAAAAAATGCTTTTTGGGACCGGGCAATTACCCAAAT TCAAAGAAGATATTTTCAAAATAGAAAATGAAAATTTGTATCTGATCCCCACCGCTGAAGTAACGCTCACCAATCTATAC AACGACACGATTGTTAGCGTTGAAAGCCTCCCCATTAAAATGACCGCGCACACGCCTTGTTTTAGGAGCGAAGCAGGGAG CGCGGGCAAGGATACAAGGGGGATGATAAGACAACACCAATTTGATAAAGTAGAACTTGTGGCTATCACGCACCCTAAAG AAAGCGATGCCATGCAAGAATATATGCTAGAGAGCGCGAGCGAAATTTTAAAGGCTTTGGAATTACCGCACCGGTTCGTG CAATTGTGCAGTGGGGATCTAGGCTTTAGCGCGAGCAACACGATAGACATTGAAGTGTGGCTGCCTGGGCAAAATTGTTA CAGAGAAATCAGCTCCGTGTCTAACACGAGGGATTTCCAGGCTAGGCGCGCCAAAATCCGCTTCAAAGAAAATCAAAAAA ACCAATTAGCGCACACCTTAAACGGCTCTTCTTTAGCGGTAGGCAGGACGATGGTCGCTTTAATGGAAAACCACCAGCAA GCGGATGGGAGCATTCACATTCCTAAGGCGTTAGAAAAATACCTTTAA Protein sequence : MIDRKLLLQDFDKVALSLKKRNNAMDDELERLREVITHYKKQLIELEGLQAFQNKVSKEFGIKMAQKADASDLKKELENN KIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGASEEDNIEIKKILTPRVFNFKPKEHFELAQKNGWIDFESGVKLA KSRFSVIRGFGAKIYRALIHLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDIFKIENENLYLIPTAEVTLTNLY NDTIVSVESLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDAMQEYMLESASEILKALELPHRFV QLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQ ADGSIHIPKALEKYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-77 | 46 |
