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Name : K749_03240 (K749_03240) Accession : YP_007980434.1 Strain : Helicobacter pylori UM299 Genome accession: NC_021216 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : - Position : 96074 - 97591 bp Length : 1518 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGGTTAATAAAGATGTGAAACAAACCACTGCTTTTGGCGCTCCCGTTTGGGATGATAACAATGTGATTACGGCTGGCCC TAGAGGTCCTGTTTTATTACAAAGCACTTGGTTTTTGGAAAAGTTAGCGGCGTTTGATCGAGAAAGGATTCCTGAAAGGG TGGTGCATGCTAAAGGAAGCGGAGCTTATGGCACTTTCACCGTGACTAAAGACATCACTAAATACACTAAAGCGAAAATT TTCTCTAAAGTGGGCAAAAAAACAGAATGCTTTTTCAGATTCTCTACTGTGGCTGGTGAAAGAGGCAGTGCGGATGCGGT GAGAGACCCTAGAGGTTTTGCGATGAAGTATTACACTGAAGAAGGTAACTGGGATTTAGTAGGGAACAACACGCCTGTTT TCTTTATCCGTGATGCGATCAAATTCCCTGATTTCATCCACACTCAAAAACGAGACCCTCAAACCAATTTGCCTAACCCC GACATGGTGTGGGATTTTTGGAGTAGTGTTCCTGAAAGCTTATACCAAGTAACATGGGTTATGAGCGATAGGGGTATTCC TAAATCTTTCCGCCACATGGATGGTTTTGGCAGCCACACTTTCAGCCTTATCAATGCGAAAGGCGAACGCTTCTGGGTGA AATTCCACTTTCACACCATGCAAGGCGTTAAGCACTTGACTAATGAAGAAGCCGCAGAAATCAGAAAGCATGATCCTGAT TCCAATCAAAGGGATTTATTCGATGCGATCGCTAGAGGGGATTTCCCAAAATGGAAATTGAGCATTCAAGTGATGCCAGA AGAAGATGCTAAAAAGTATCGATTCCATCCGTTTGATGTGACTAAAATTTGGTATCTCAAAGATTATCCGTTGATGGAAG TGGGCATTGTAGAGTTGAATAAAAATCCTGAAAACTATTTCGCAGAAGTGGAGCAAGCGGCATTCACTCCGGCTAATGTC GTTCCTGGGATTGGCTATAGCCCTGATAGGATGTTACAAGGGCGCTTGTTCTCTTATGGAGACACACACCGCTACCGCTT AGGCGTTAATTATCCTCAAATACCGGTTAATAAACCAAGATGCCCGTTCCACTCTTCTAGCAGAGATGGTTACATGCAAA ACGGATACTACGGCTCTTTACAAAACTATACGCCTAGCTCATTGCCAGGTTATAAAGAAGATAAGAGTGCGAGGGATCCT AAGTTCAACTTAGCTCATATTGAGAAAGAGTTTGAAGTGTGGAATTGGGATTACAGAGCTGATGATAGCGATTACTACAC CCAACCAGGTGATTACTACCGCTCGTTGCCAGCTGATGAAAAAGAAAGGTTGTATGACACTATTGGAGGATCTTTAGCTC ATGTTACCCATAAAGAAATTGTGGATAAACAATTGGAGCATTTCAAGAAAGCTGACCCCAAATACGCTGAGGGAGTTAAA AAAGCTCTTGAAAAACACCAAAAAATGATGAAAGACATGCATGGAAAAGACATGCACCACATGAAAAAGAAAAAGTAA Protein sequence : MVNKDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKI FSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNP DMVWDFWSSVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEIRKHDPD SNQRDLFDAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLKDYPLMEVGIVELNKNPENYFAEVEQAAFTPANV VPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDP KFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLYDTIGGSLAHVTHKEIVDKQLEHFKKADPKYAEGVK KALEKHQKMMKDMHGKDMHHMKKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 3e-136 | 60 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 5e-93 | 52 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 1e-90 | 47 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 1e-90 | 47 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 1e-90 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 1e-90 | 47 |
