Gene Information

Name : K749_01310 (K749_01310)
Accession : YP_007980059.1
Strain : Helicobacter pylori UM299
Genome accession: NC_021216
Putative virulence/resistance : Virulence
Product : sodium:calcium antiporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 479240 - 480685 bp
Length : 1446 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTTTAGAAAACTAGCAACCGCTGTATCGCTCATAGGCTTACTAATCTCTAACACTCTTTATGCTAAAGAAATAAGTGA
AGCCGATAAGGTCATTAAGGCCACTAAAGAAACTAAAGAAACCAAGAAAGAAGCTAAACGACTCAAAAAAGAAGCCAGAC
AGCGCCAACAGATCCCTGATCATAAGAAACCTCAATATGTTTCTGTTGATGACACAAAAACTCAAGCGCTTTTTGATATA
TACGACACCTTGAATGTGAATGACAAAAGCTTTGGTGATTGGTTTGGTAATAGCGCTTTGAAAGACAAAACCTATCTCTA
CGCTATGGATCTGTTGGATTACAACAACTATCTATCCATAGAAAACCCCATTATCAAAACAAGAGCGATGGGGACTTATG
CGGATCTTATCATCATCACAGGCTCACTAGAACAAGTCAATGGGTATTACAACATTCTAAAAGCGCTCAACAAACGAAAC
GCTAAGTTTGTCTTAAAAATCAATGAAAACCTGCCTTACGCCCAAGCGACTTTTTTGAGAGTGCCAAAAAGAAGCGATCC
CAATGCCCATACGCTTGATAAGGGAGCGTCAATTGATGAGAATAAGCTTTTTGAACAACAAAAACGCGCGTATTTCAACT
ACGCCAACGATGTGATCTGCAGACCCAATGATGAAGTGTGTTCGCCTCTAAGAGATGAAATGGTAGCTATGCCCACTAGC
GATAGCGCTACTCAAAAACCTAATATCATTGCTCCTTATAGCTTGTATAGACTAAAAGAGACAAATAACGCCAATGAGGC
TCAACCATCACCTTATGCCACTCAAACCGCTCCTGAAAACAGCAAAGAGAAGCTCATAGAAGAGCTAATCGCTAACTCCC
AACTCATAGCCAATGAAGAAGAGAGGGAAAAGAAACTCTTAGTAGAAAAAGAAAAACAAGAGGCTGAATTGGCTAAATAC
AAGCTCAAAGACTTAGAAAATCAAAAGAAACTAAAAGTTTTAGAAGCAGAGTTGAAAAAGAAAAATGCTAAGAAACCTAG
AGTGGTGGAAGTGCCTATTTCTCCTAGAACAAGTAATCCTGATGAAACAATGAGAGTTGTCAAGGAAAAAGAAAATTATA
ATGGATTGTTAGTGGATAAAGAAACCACGATCAAAAGAAGCTATGAGGGGACTTTGATCAGTGAAAATTCTTATAGCAAA
AAAACACCTCTCAACCCCAATGACTTGAGAAGCTTAGAAGAAGAAATCAAGAGCTACTATATTAAGTCTAATGGCTTGTG
TTATGCTAATGGCATTAGTCTCTATGTAAAAATCAAAAACGACCCCTATAAAGAGGGAATGCTGTGTGGCTATGAGAGTA
TTCAAAATCTGCTCTCACCTCTAAAGGACAAGCTCAAGTACGACAAGCAAAAGTTACAAAAAGCGTTACTGAAAGATTCA
AAGTAA

Protein sequence :
MFRKLATAVSLIGLLISNTLYAKEISEADKVIKATKETKETKKEAKRLKKEARQRQQIPDHKKPQYVSVDDTKTQALFDI
YDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSIENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRN
AKFVLKINENLPYAQATFLRVPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS
DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEEEREKKLLVEKEKQEAELAKY
KLKDLENQKKLKVLEAELKKKNAKKPRVVEVPISPRTSNPDETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSK
KTPLNPNDLRSLEEEIKSYYIKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSPLKDKLKYDKQKLQKALLKDS
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0522 BAD13855.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-168 99
HP0522 BAD13774.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-170 99
HP0522 BAD13883.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-170 99
cag3 YP_005775725.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-168 99
HP0522 BAD13801.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-170 99
cag3 YP_005779068.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-170 99
HP0522 BAD14047.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-170 99
cag3 YP_005777266.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-170 99
HP0522 BAD13938.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-170 99
cag3 YP_005774547.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-170 99
HP0522 BAD13828.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-171 99
HP0522 BAD13910.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-169 98
cag3 YP_003728744.1 cag pathogenicity island protein delta Virulence cag PAI Protein 1e-167 97
HP0522 BAD14021.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-167 97
HP0522 NP_207318.1 cag pathogenicity island protein (cag3) Virulence cag PAI Protein 6e-168 97
cag3 AAR03914.1 Cag3 Virulence cag PAI Protein 2e-167 97
cag3 AGC69793.1 cag pathogenicity island protein 3 Virulence cag PAI Protein 9e-168 97
cag3 AAR03854.1 Cag3 Virulence cag PAI Protein 5e-168 97
cag-delta AAF80193.1 Cag-delta Virulence cag PAI Protein 4e-168 97
cag3 AAR03885.1 Cag3 Virulence cag PAI Protein 1e-165 97
cag3 AAR03945.1 Cag3 Virulence cag PAI Protein 1e-167 97
HP0521 BAD13993.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-166 97
HP0521 BAD13965.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-166 97
orf8 NP_223189.1 cag island protein Virulence cag PAI Protein 3e-164 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K749_01310 YP_007980059.1 sodium:calcium antiporter VFG0282 Protein 2e-168 97