Gene Information

Name : K749_01390 (K749_01390)
Accession : YP_007980075.1
Strain : Helicobacter pylori UM299
Genome accession: NC_021216
Putative virulence/resistance : Virulence
Product : sodium:calcium antiporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 458435 - 459565 bp
Length : 1131 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCTTGCAAAAATCGTTTTTAGCTCATTGGTTGCGTTTGGAGTTTTGTCGGCTAATGTGGAGCAGTTTGGTTCATTTTT
CAACGAGATAAAAAAAGAACAAGAAGAGGTGGCTGCAAAAGAAGACGCTCTTAAGGCTAAAAAGAAGCTCTTAAACAATA
CGCATGATTTCTTAGAAGACTTGATTTTTAGAAAACAAAAAATCAAAGAGCTTATGGATCATAGAGCTAAAGTTCTTTTA
GACTTAGAAAACAAATACAAAAAAGAAAAAGAGGCTCTAGAGAAAGAGACAAGGGGTAAAATCCTTACTGCTAAGTCAAA
GGCTTATGGTGATCTAGAGCAAGCCTTAAAAGATAACCCTCTCTATAAAAAACTTCTTCCTAACCCTTATGCCTATGTTT
TAAACCAAGAAACATTCACCAAAGAAGATAAGGAGCGTTTGAGTTATTACTACCCCCAAGTGAAAACGAGCAGTATTTTT
AAAAAAACTACCGCTACCACTAAAGATAAGGCTTTGGCTTTGCTTCAAATGGGTGTGTTTTCTTTAGATGAAGAACAAAA
CAAAAAAGCGAGCCGATTAGCTTTATCTTACAAGCAAGCGATTGAAGAATATTCCAATAACATTTCTAATTTATTGAGCA
GAAAAGAATTGGATAATATAGATTATTACTTACAGCTTGAAAGAAACAAGTTTGACTCTAAAGCAAAAGATATTGCTCAA
AAAGCTACTAACACGCTTATTTTTAACTCGGAACGCTTGGCGTTTAGCATGGCGATTGATAAGATCAATGAGAAATACTT
AAAGGGCTATGAGGCTTTTTCTAACTTGTTGAAAAATGTCAAAGATGATGTGGAATTGAATACTCTGACTAAAAACTTTA
CCAATCAAAAATTGAGTTTCGCTCAAAAACAAAAATTGTGTTTGTTGGTTTTAGACAGCTTCAATTTTGATACCCAATCC
AAAAAATCTATATTAAAAAAGACTAATGAATACAATATTTTCGTAGATAGCGATCCTATGATGAGCGACAAAACAACTAT
GCAAAAAGAACACTACAAGATATTTAATTTCTTCAAAACAGTGCTTTCTGCATACCGAAACAATGTTGCCAAGAATAATC
CCTTTGAATAG

Protein sequence :
MLAKIVFSSLVAFGVLSANVEQFGSFFNEIKKEQEEVAAKEDALKAKKKLLNNTHDFLEDLIFRKQKIKELMDHRAKVLL
DLENKYKKEKEALEKETRGKILTAKSKAYGDLEQALKDNPLYKKLLPNPYAYVLNQETFTKEDKERLSYYYPQVKTSSIF
KKTTATTKDKALALLQMGVFSLDEEQNKKASRLALSYKQAIEEYSNNISNLLSRKELDNIDYYLQLERNKFDSKAKDIAQ
KATNTLIFNSERLAFSMAIDKINEKYLKGYEAFSNLLKNVKDDVELNTLTKNFTNQKLSFAQKQKLCLLVLDSFNFDTQS
KKSILKKTNEYNIFVDSDPMMSDKTTMQKEHYKIFNFFKTVLSAYRNNVAKNNPFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cag16 AAR03871.1 Cag16 Virulence cag PAI Protein 4e-139 99
HP0537 BAD13870.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-140 99
cagM AAC44695.1 CagM Virulence cag PAI Protein 3e-139 99
cag16 AAR03899.1 Cag16 Virulence cag PAI Protein 3e-139 99
HP0537 BAD13980.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-139 99
HP0537 BAD13789.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-139 99
HP0537 BAD13925.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-137 99
cagM YP_005777278.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-139 99
HP0537 BAD13953.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-140 99
cag16 AAR03960.1 Cag16 Virulence cag PAI Protein 4e-138 99
cagM YP_005779056.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-139 99
cagM YP_005774534.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-139 99
HP0537 BAD13843.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-140 99
cagM YP_005775737.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-140 99
HP0537 BAD13898.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-140 99
cagM NP_223203.1 cag island protein Virulence cag PAI Protein 1e-137 98
HP0537 BAD14035.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-137 98
cagM YP_003728727.1 cag pathogenicity island protein M Virulence cag PAI Protein 1e-138 98
HP0537 BAD13816.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-137 98
HP0537 NP_207333.1 cag pathogenicity island protein (cag16) Virulence cag PAI Protein 1e-138 98
cag16 AAR03929.1 Cag16 Virulence cag PAI Protein 3e-138 98
cagM AGC69800.1 cag pathogenicity island protein M Virulence cag PAI Protein 9e-139 98
HP0537 BAD14008.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-136 97
HP0537 BAD14062.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-131 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K749_01390 YP_007980075.1 sodium:calcium antiporter VFG0296 Protein 5e-139 98