Gene Information

Name : K749_01395 (K749_01395)
Accession : YP_007980076.1
Strain : Helicobacter pylori UM299
Genome accession: NC_021216
Putative virulence/resistance : Virulence
Product : sodium:calcium antiporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 457500 - 458420 bp
Length : 921 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
TTGAAAAGTATCTTCAAAAAACTAGGTTCTGTCGCTCTTTATTTTTTAGTTATTTATGGGGGCTTAAACGCTATCAATAC
AGCATTATTACCGAGTGAATACAAAGAATTAGTGGCTTTAGGCTTTAAAAAAATCAAAACATTCCATCAAAGACATGACG
ACAAAGAAATTACAGAAGAGGAAAAAAAATTCGCCACTAACGCTTTGAGAGAAAAATTACGAAACGATAGGGCGAGAGCA
GAGCAAATTCAAAAGAATATTGAAGCGTTTGAAAAAAAGAATAACTCTTCTATTCAAAAAAAAGCGGCTAAACACAAAGG
ACTACAAGAATTAAACGAAATTAACGCTAACCCTTTGAATGACAACCCTAATAGCAATTCTTCCACTGAAACCAAATCCA
ATAAAGATGATAACTTTGATGAGATGATCAATAAGGTGAATGAAGCTTTTGTGAAACCTGCTGCTCCGCTTGTGCCTAAT
GAGTGGAGAACACCTGAAATTGAAATCATTATCAATGAGTGTATTATTTCAAGCAACGATTACGATGGGTTAAGAAAGTG
TTTGATCAAAGGCATCAAGGATCAAAAAATTCTTGCCCCCTTATTAGAAAAAATTCAAGAAATAGAGACAGAAAATAACA
AGTTTTCTAGACAACACTTGAGTGGTTTAAAGCTCGCTCTTAATAACAGCAACAATAGAACCTTTCTTATAGCTTCATGC
GCTATTTGTGAGAAGAGAAAAAAAGAAATGGAGCAAGAAAACAACCACCAAGATACTACAAATGCAAGTGAGTTTGGAGC
TACTGATACAAAAGAAAATGAAGCAAAAGATGCAGCATTCTCAAACAACCGCTCTAAATCTGAACTGCCTAATAGCGTCA
TTAATCAAATAGAACAAAGCATCGCTCATGGAAAAAAATAG

Protein sequence : 
MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKELVALGFKKIKTFHQRHDDKEITEEEKKFATNALREKLRNDRARA
EQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNEINANPLNDNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLVPN
EWRTPEIEIIINECIISSNDYDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC
AICEKRKKEMEQENNHQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQSIAHGKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cagN YP_005774533.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-117 99
HP0538 BAD13981.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-116 99
HP0538 BAD14063.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-114 99
HP0538 BAD13954.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-114 99
HP0538 BAD13871.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-117 98
HP0538 BAD13844.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-111 98
cagN YP_005779055.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-112 98
HP0538 BAD13817.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-113 98
HP0538 BAD13790.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-113 98
cagN YP_005777279.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-113 98
HP0538 BAD13899.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-113 98
cagN YP_005775738.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-117 98
HP0538 BAD14009.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-113 98
HP0538 NP_207334.1 cag pathogenicity island protein (cag17) Virulence cag PAI Protein 2e-114 97
cag17 AAR03961.1 Cag17 Virulence cag PAI Protein 3e-114 97
cagN AAF80207.2 CagN Virulence cag PAI Protein 3e-113 96
HP0538 ABC25004.1 cag pathogenicity island protein N Virulence cag PAI Protein 1e-110 96
HP0538 BAD14036.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-113 96
cagN YP_003728726.1 cag pathogenicity island protein N Virulence cag PAI Protein 4e-112 96
cag17 AAR03872.1 Cag17 Virulence cag PAI Protein 2e-113 96
cag17 AAR03930.1 Cag17 Virulence cag PAI Protein 5e-115 96
HP0538 BAD13926.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-113 95
cagN NP_223204.1 cag island protein Virulence cag PAI Protein 3e-113 95
cag17 AAR03900.1 Cag17 Virulence cag PAI Protein 3e-112 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K749_01395 YP_007980076.1 sodium:calcium antiporter VFG0297 Protein 8e-115 97