Gene Information

Name : K749_02145 (K749_02145)
Accession : YP_007980226.1
Strain : Helicobacter pylori UM299
Genome accession: NC_021216
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 297551 - 298297 bp
Length : 747 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :

TTGCGTTTTTTCATTTTTTTAATCCTCATTTGCCCTTTAATATGCCCTTTAATGAGCGCTGATAGTGCATTGCCCAGCGT
CAATCTCTCTTTAAACGCTCCTAATGATCCTAAACAGCTTGTAACCACCCTTAATGTCATCGCCCTACTCACGCTGTTAG
TTTTAGCCCCGTCATTGATTTTAGTGATGACGAGTTTCACCCGTTTGATCGTGGTGTTTTCTTTTTTAAGGACCGCTTTA
GGCACGCAACAAACCCCACCCACTCAAATTTTAGTCTCGCTCTCTTTGATATTGACTTTTTTCATCATGGAACCTAGTTT
GAAAAAGGCTTATGACACAGGGATTAAGCCTTATATGGATAAAAAGATTTCTTACACCGAAGCGTTTGAAAAAAGCGCTC
TGCCCTTCAAGGAATTCATGCTTAAAAACACACGAGAAAAGGATCTAGCCCTTTTTTTTAGGATTAGAAACCTCCCCAAC
CCTAAAACCCCTGATGAGGTGAGTTTGAGCGTTTTAATCCCAGCATTTATGATAAGCGAGTTGAAAACAGCGTTTCAAAT
CGGATTTTTACTCTACTTGCCTTTTTTGGTGATTGATATGGTTATTAGCTCTATTTTAATGGCGATGGGCATGATGATGC
TCCCGCCCGTAATGATTTCTCTGCCTTTTAAAATTTTAGTGTTTATTCTGGTAGATGGGTTTAATTTATTGACCGAAAAT
TTAGTGGCGAGTTTTAAAATGGTTTAA

Protein sequence :

MRFFIFLILICPLICPLMSADSALPSVNLSLNAPNDPKQLVTTLNVIALLTLLVLAPSLILVMTSFTRLIVVFSFLRTAL
GTQQTPPTQILVSLSLILTFFIMEPSLKKAYDTGIKPYMDKKISYTEAFEKSALPFKEFMLKNTREKDLALFFRIRNLPN
PKTPDEVSLSVLIPAFMISELKTAFQIGFLLYLPFLVIDMVISSILMAMGMMMLPPVMISLPFKILVFILVDGFNLLTEN
LVASFKMV

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
escR	AFO66317.1	putative LEE-encoded type III secretion system factor	Virulence	SESS LEE	Protein	3e-22	46
escR	AFO66400.1	putative LEE-encoded type III secretion system factor	Virulence	SESS LEE	Protein	3e-22	46
ssaR	CAA68199.1	secretion system apparatus, SsaR	Virulence	SPI-2	Protein	8e-26	45
yscR	NP_456109.1	putative type III secretion protein	Virulence	SPI-2	Protein	5e-25	45
yscR	NP_805090.1	type III secretion system protein	Virulence	SPI-2	Protein	5e-25	45
ssaR	YP_216427.1	type III secretion system protein	Virulence	SPI-2	Protein	1e-25	45
ssaR	NP_460384.1	type III secretion system protein	Virulence	SPI-2	Protein	1e-25	45
escR	AAC38369.1	EscR	Virulence	LEE	Protein	1e-20	45
escR	YP_003236103.1	T3SS structure protein EscR	Virulence	LEE	Protein	4e-21	45
escR	NP_290283.1	type III secretion system protein	Virulence	LEE	Protein	4e-21	45
escR	AAK26700.1	EscR	Virulence	LEE	Protein	3e-21	45
ECs4583	NP_312610.1	type III secretion system protein	Virulence	LEE	Protein	4e-21	45
escR	AAL57527.1	EscR	Virulence	LEE	Protein	3e-21	45
escR	CAC81847.1	EscR protein	Virulence	LEE II	Protein	3e-21	45
escR	CAI43889.1	EscR protein	Virulence	LEE	Protein	3e-21	45
escR	YP_003223490.1	T3SS structure protein EscR	Virulence	LEE	Protein	4e-21	45
escR	AAC31528.1	L0049	Virulence	LEE	Protein	3e-21	45
escR	YP_003232138.1	type III secretion system protein	Virulence	LEE	Protein	4e-21	45
escR	ACU09473.1	type III secretion system protein EscR	Virulence	LEE	Protein	3e-21	45
unnamed	AAL06354.1	EscR	Virulence	LEE	Protein	6e-21	43
lscR	AAO18040.1	LscR	Virulence	TTSS locus	Protein	6e-24	42
YPO0270	YP_002345352.1	type III secretion system protein	Virulence	Not named	Protein	1e-22	42

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
K749_02145	YP_007980226.1	flagellar biosynthesis protein FliP	VFG2338	Protein	6e-41	55
K749_02145	YP_007980226.1	flagellar biosynthesis protein FliP	VFG2016	Protein	1e-40	54
K749_02145	YP_007980226.1	flagellar biosynthesis protein FliP	VFG1259	Protein	1e-41	54
K749_02145	YP_007980226.1	flagellar biosynthesis protein FliP	VFG2494	Protein	1e-43	54
K749_02145	YP_007980226.1	flagellar biosynthesis protein FliP	VFG0519	Protein	5e-26	45
K749_02145	YP_007980226.1	flagellar biosynthesis protein FliP	VFG0827	Protein	2e-21	45
K749_02145	YP_007980226.1	flagellar biosynthesis protein FliP	VFG0715	Protein	8e-21	45
K749_02145	YP_007980226.1	flagellar biosynthesis protein FliP	VFG0044	Protein	1e-23	41
K749_02145	YP_007980226.1	flagellar biosynthesis protein FliP	VFG0394	Protein	9e-23	41