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Name : K749_04335 (K749_04335) Accession : YP_007980647.1 Strain : Helicobacter pylori UM299 Genome accession: NC_021216 Putative virulence/resistance : Virulence Product : molecular chaperone ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 1476445 - 1479015 bp Length : 2571 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAATTTATTTGAAAAAATGACCGACCAATTGCATGAGACTTTAGACAGCGCGCTCGCTCTAGCCTTACACCATAAAAA CGCTGAAGTAACGCCCTTGCACATGCTTTTTGTCATGCTCAATAACTCCCAAGGCATCCTCATTCAAGCCTTACAAAAAA TGTCTGTGGATATTCAAGCCTTGAGGCTTAGCGTTCAAAGCGAGTTGAATAAGTTGGCTAAAGTTTCACAAATCAACAAG CAAAACATCCAATTAAACCAAGCTCTAATCCAAAGTTTAGAAAACGCTCAAGGCTTGATGGCTAAAATGGGCGATTCTTT CATCGCTACAGATGTGTATCTTTTGGCGAACATGAGCCTTTTTGAAAGCGTTCTAAAACCTTATTTAGACACTAAAGAAT TGCAAAAAACTTTAGAGTCTTTGAGAAAAGGCGCGACTATCCAGGATAAAAACGATGATTCTAATTTGGAAAGTTTGGAA AAATTTGGCATTGATTTGACGCAAAAAGCCTTAGAAAATAAGCTCGATCCGGTGATTGGGAGGGATGAAGAAATCATTCG CATGATGCAAATTTTGATAAGAAAAACAAAAAATAACCCTATTTTACTGGGTGAGCCTGGAGTGGGGAAAACGGCGGTTG TGGAGGGTTTGGCCCAACGCATTGTGAATAAGGAAGTGCCTAAAACGCTTTTAAACAAACGAGTCGTCGCTTTAGATTTA AGCTTATTGGTGGCTGGAGCGAAATACAGAGGCGAGTTTGAAGAGCGCTTGAAAAAGGTGATTGAAGAAGTGAAAAAAAG CGCGAATGTGATTTTATTCATTGATGAAATCCATACGATTGTAGGGGCTGGGGCTAGTGAGGGGGGCATGGATGCGGCTA ATATTTTAAAACCCGTGCTCGCTAGGGGGGAATTGCACACGATTGGAGCGACCACTTTGAAAGAATACCGCAAGTATTTT GAAAAAGACATGGCGTTACAAAGGCGTTTCCAACCCATTTTACTCAATGAGCCTAGCATCAATGAAGCTTTACAGATTTT AAGGGGGTTAAAAGAAACTTTAGAAACGCACCATAATATCACCATCAACGACTCCGCGCTCATAGCGAGCGCTAAACTCT CTAGCCGTTATATCACCGATAGGTTTTTACCCGATAAAGCGATTGATTTGATTGATGAGGGGGCGGCCCAATTAAAAATG CAAATGGAATCAGAGCCGGCAAAACTCTCTAGCGTTAAGCGCTCCATTCAAAGATTAGAAATGGAAAAACAAGCCCTTGA AATGGAAAAAAAAGAGAGCAATGCCAAACGCATGCAAGAAATCCTTAAAGAATTGAGCGATCTGAAAGAAGAAAAAATCC AATTAGAAGCGCAATTTGAAAACGAAAAAGAAGTGTTTAGAGAAATTTCACGCTTGAAAATGGAAACGGAAAGCTTGAAA AAAGAGGCTGATAGGTTTAAGCGCAATGGGGATTACCAGCAAGCGGGTGAAATTGAATACTCTAAAATCCCTGAAAATAA AAAGAAAGAAGAAGAATTGCAGCACAAATGGGAAGCGATGCAACAAAACGGGGCGTTGTTGCAAAACGCTTTAACCGAAA ACAACATCGCTGAGATCGTGAGCCAATGGACGCATATCCCGGTCCAAAAAATGCTCCAGAGCGAAAAAAATAGGGTTTTA AACATTGAAAGCGAATTGCAAAAAAGAGTGGTGGGGCAAGAAAAAGCAATCAAAGCGATCGCTAAAGCGATTAAAAGGAA TAAGGCCGGGCTTAGCGATAGCAATAAACCCATAGGGAGTTTTCTCTTTTTAGGGCCAACGGGCGTGGGTAAAACCGAGA GCGCTAAAGCTTTGGCGCAATTCTTGTTTGATAGCGATAAAAATCTTATAAGAATTGACATGAGCGAATACATGGAAAAA CATGCCATAAGCCGTCTTATTGGGGCTGCGCCTGGGTATGTGGGCTATGAAGAAGGCGGGCAATTGACCGAAGCGGTGCG CAGAAAACCCTATAGCGTGGTGCTGTTAGATGAAGTGGAAAAAGCCCATCCGGATGTGTTTAATCTTTTGTTGCAGGTTT TAGATGAAGGGCATTTAACCGATAGTAAGGGCGTGAGGGTGGATTTCAAAAACACGATTTTGATTTTAACCAGCAATGTG GCTAGCGGCGTGCTTTTGGAAGAGAGTTTGAGTGAAGCCGATAAACAAAAAGCGATTAAAGAGAGCTTGAGGCAATTCTT CAAGCCGGAATTTTTAAACCGCTTAGATGAAATCATCTCCTTTAACGCCCTAGATAGCCATGCTATCGCTAATATCGTGG GGATTCTCTTTGAAAACATTCAAAAAAAGGCGCTTGAAAGGGGCATTAATATAACCCTAGACGAAGAGGCAAAAGAATTG ATCGCTGAAGTGGGATTTGACAGATTTTATGGCGCTAGACCCTTAAAGCGAGCGCTCTATGAAATGGTAGAAGACAAGCT CGCTGAACTCATCTTAGAGGATAAGATTAAAGAAAATGGTAGCGTGGCGTTTGTGGTAGAAAATAACGAAATTGTGCCTA AGATTAAGTGA Protein sequence : MNLFEKMTDQLHETLDSALALALHHKNAEVTPLHMLFVMLNNSQGILIQALQKMSVDIQALRLSVQSELNKLAKVSQINK QNIQLNQALIQSLENAQGLMAKMGDSFIATDVYLLANMSLFESVLKPYLDTKELQKTLESLRKGATIQDKNDDSNLESLE KFGIDLTQKALENKLDPVIGRDEEIIRMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVNKEVPKTLLNKRVVALDL SLLVAGAKYRGEFEERLKKVIEEVKKSANVILFIDEIHTIVGAGASEGGMDAANILKPVLARGELHTIGATTLKEYRKYF EKDMALQRRFQPILLNEPSINEALQILRGLKETLETHHNITINDSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKM QMESEPAKLSSVKRSIQRLEMEKQALEMEKKESNAKRMQEILKELSDLKEEKIQLEAQFENEKEVFREISRLKMETESLK KEADRFKRNGDYQQAGEIEYSKIPENKKKEEELQHKWEAMQQNGALLQNALTENNIAEIVSQWTHIPVQKMLQSEKNRVL NIESELQKRVVGQEKAIKAIAKAIKRNKAGLSDSNKPIGSFLFLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYMEK HAISRLIGAAPGYVGYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILILTSNV ASGVLLEESLSEADKQKAIKESLRQFFKPEFLNRLDEIISFNALDSHAIANIVGILFENIQKKALERGINITLDEEAKEL IAEVGFDRFYGARPLKRALYEMVEDKLAELILEDKIKENGSVAFVVENNEIVPKIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 8e-140 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| K749_04335 | YP_007980647.1 | molecular chaperone ClpB | VFG0079 | Protein | 2e-154 | 42 |
| K749_04335 | YP_007980647.1 | molecular chaperone ClpB | VFG2076 | Protein | 2e-111 | 42 |
