Gene Information

Name : K749_04475 (K749_04475)
Accession : YP_007980675.1
Strain : Helicobacter pylori UM299
Genome accession: NC_021216
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1450260 - 1451180 bp
Length : 921 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
GTGAGAAATTTGGTGATTGGCTCTAGGGGGAGCGAATTAGCCTTATGGCAAGCAAATCACATTAAAGAACGCCTGAAAAA
AGAATGCCTTATAGAAAGCGAGATTCAAATCGTTAAGACTAAGGGCGATAAAATCTTAGACACCCCTTTAAATAAGATTG
GCGGTAAGGGGCTATTCACTAAGGAATTAGAAGAATTGCTTTTAAAAGGCGAAATTGATTTGGCGGTGCATTCTTTAAAA
GATGTGCCGGTCGTGTTTGAAAAGGGGTTAGACTTGGCATGCATCACCAAAAGGGCTGATGTGAGAGACACTTTTTTAAG
CGTGAAATTCCCTGATTTGATGAGCTTGCCTAAAGGGGCAAAGGTTGGCACAACTTCTTTAAGGCGCTCCATGCAGCTCA
AACTGAAGCGCCAGGATTTGGACACAGAAAGCTTAAGGGGGAATGTCCAAACCCGTTTGAAAAAGCTTGAATGCGGAGAA
TTTGACGCTATCATTTTAGCTGAAGCTGGGTTATGCCGCCTAGAAATTCAAGGAGCGAAATACCGCAAGGCTTTTAGCGT
GGAAGAAATGATTCCTAGCATGGGTCAGGGGGCTTTAGGGGTGGAAATGCTCAAAAGCCACAAGCATTTTGCCACGCTTC
AAAAACTCAACGACACAGAAAGCGCGTTTTGCTGCCATTTAGAAAGGGAGTTTATTAAGGGGCTTAATGGAGGGTGTCAG
ATCCCTATTGGCGTGCATGCGAGTTTAATGGGTGATAGGGTTAAAATCCAGGCGGTTTTAGGCTTGCCTAACGGGAAAGA
AATCATCACTAAAGAAAAGCAAGGGGATAAAACTAAGGCGTTTGATCTGGTTCAAGAGCTTTTAGAAGCGTTTTTGCAAA
GCGGGGCTAAAGAGATTTTAGAAAAGGCGCAGTTGTTTTAA

Protein sequence :
MRNLVIGSRGSELALWQANHIKERLKKECLIESEIQIVKTKGDKILDTPLNKIGGKGLFTKELEELLLKGEIDLAVHSLK
DVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGE
FDAIILAEAGLCRLEIQGAKYRKAFSVEEMIPSMGQGALGVEMLKSHKHFATLQKLNDTESAFCCHLEREFIKGLNGGCQ
IPIGVHASLMGDRVKIQAVLGLPNGKEIITKEKQGDKTKAFDLVQELLEAFLQSGAKEILEKAQLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-44 46
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-44 46