|
Name : K749_04995 (K749_04995) Accession : YP_007980773.1 Strain : Helicobacter pylori UM299 Genome accession: NC_021216 Putative virulence/resistance : Unknown Product : lactate permease Function : - COG functional category : - COG ID : - EC number : - Position : 1354316 - 1355962 bp Length : 1647 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGGAATTTTATCAAGTCTATGACCCATTAGGCAATATTTGGCTGAGCGCTTTAGTGGCGCTATCGCCTATCGCGCTCTT TTTTATTTCTCTTATTGTCTTTAAACTTAAAGGGTATAGTGCTGGGTTTTTAAGCTTAGTGCTTTCAATCATTATTGCGT TATTTGTGTATAAAATGCCTGCTCAAATGGTGAGCGCGAGTTTTTTCTATGGCTTTCTTTATGGCTTGTGGCCGATCGCT TGGATTGTGATCGCTGCGATTTTTCTTTACAACCTTTCAGTGAAATCCGGGTATTTTGAGATTTTAAAAGAAAGCATTTT AACCCTAACGCCGGATCACCGCATTTTAGTGATTTTGATTGGCTTTTGTTTTGGCTCGTTTTTAGAAGGAGCGATCGGTT TTGGAGGCCCGGTAGCGATCACAGCAGCGATTTTAGTCGGCCTTGGGCTAAACCCCTTATACGCTGCCGGATTGTGCCTA ATCGCTAACACCGCTCCTGTAGCTTTTGGCGCGGTGGGTATTCCTATTACAGCAATGGCTAGTGTGGTGGGTATCCCTGA GTTAGAGATTTCTCAAATGGTGGGCAGAGTGTTACCCATTTTTTCCATTGGTATTCCTTTTTTCATCGTGTTTTTAATGG ATGGTTTTAGAGGGATTAGAGAAACTTTTCCTGCAGTGGCTGTTACCGGGTTTAGTTTCGCTATTGCGCAATTTTTAAGC TCTAATTATCTAGGGCCGCAACTCCCGGACATTATTTCAGCCTTGGTGTCATTGATCGCTACCACTTTATTTTTAAAAGT CTGGCAACCCAAGCGCATTTTCACCAGCAATGGCAAAGAGCCTGCAATCAGCACAGAAAAACACCATATTTGTAAGGTGG TTGTGGCGTGGATGCCTTTTGTGTTGCTCACTATTACGATTATCATATGGACGCAACCCTGGTTTAAAGCACTCTTTAAA GAAGGCGGGGCTTTGGCGTTTTCTAGTTTTGCGTTTGAATTTAATTCTATCAGTCAAAAGATTTTTAAAACCGTTCCCAT TGTTACTGAAGCGACCAATTTTCCTGTCGTGTTCAAATTCCCTTTGATTCTAACGACAGGCACTTCCATTTTTTTAGCCG CTCTTTTAAGCGTGTTTTTGTTGCGCGTGAAAATCAGCGATGCGATAGGGGTGTTTGGGGCCACTTTAAAAGAAATGCGT TTGCCGATTTTAACCATTGGCGTGGTTTTAGCGTTTGCGTATGTGGCTAATTATAGCGGCATGAGCGCTACGCTCGCTTT AGCGTTAGGGGATACTGGGCATGTTTTCACTTTCTTTTCGCCTGTTGTAGGCTGGCTTGGGGTGTTTTTAACCGGAAGCG ATACGAGTTCTAATCTTTTATTTGGCTCTTTGCAAATGCTCATCGCTACACAGCTTGGCTTGCCTGAAGTGCTTTTCTTG GCGGCAAACACTTCAGGGGGTGTTGTGGGTAAAATGATAAGCCCTCAAAGTATCGCTATCGCTTGCGCGGCGGTGGGGTT AGTGGGGAAAGAGAGCGAATTGTTTAGATTTACGGTAAAATACTCCGTCGCTTTGGCGATCATTATGGGGATTGTCTTCA CTCTTATTGCTTATGTCTTCCCCTTTATTATCCCCATCATTCCTTAA Protein sequence : MEFYQVYDPLGNIWLSALVALSPIALFFISLIVFKLKGYSAGFLSLVLSIIIALFVYKMPAQMVSASFFYGFLYGLWPIA WIVIAAIFLYNLSVKSGYFEILKESILTLTPDHRILVILIGFCFGSFLEGAIGFGGPVAITAAILVGLGLNPLYAAGLCL IANTAPVAFGAVGIPITAMASVVGIPELEISQMVGRVLPIFSIGIPFFIVFLMDGFRGIRETFPAVAVTGFSFAIAQFLS SNYLGPQLPDIISALVSLIATTLFLKVWQPKRIFTSNGKEPAISTEKHHICKVVVAWMPFVLLTITIIIWTQPWFKALFK EGGALAFSSFAFEFNSISQKIFKTVPIVTEATNFPVVFKFPLILTTGTSIFLAALLSVFLLRVKISDAIGVFGATLKEMR LPILTIGVVLAFAYVANYSGMSATLALALGDTGHVFTFFSPVVGWLGVFLTGSDTSSNLLFGSLQMLIATQLGLPEVLFL AANTSGGVVGKMISPQSIAIACAAVGLVGKESELFRFTVKYSVALAIIMGIVFTLIAYVFPFIIPIIP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcA | CAE85240.1 | GlcA protein, putative glycolate permease | Not tested | PAI V 536 | Protein | 2e-133 | 55 |
