|
Name : K749_08860 (K749_08860) Accession : YP_008357709.1 Strain : Helicobacter pylori UM299 Genome accession: NC_021216 Putative virulence/resistance : Resistance Product : cystathionine beta-lyase Function : - COG functional category : - COG ID : - EC number : 2.5.1.48 Position : 1321505 - 1322647 bp Length : 1143 bp Strand : + Note : catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGCGCATGCAAACAAAATTAATCCATGGGGGTATTAGTGAGGACGCAGTAACGGGGGCGGTGAGCGTGCCTATTTATCA AACTTCCACCTACCGCCAAGACGCCATAGGCCGCCATAAGGGCTATGAATACTCTCGCTCAGGCAACCCCACGCGCTTTG CTTTAGAAGAACTTATCGCCGATTTAGAAGGGGGGGTTAAGGGGTTTGCTTTTGCCTCTGGTTTAGCTGGGATCCACGCC GTTTTTTCTCTCTTGCAATCAGGCGATCATGTGCTATTAGGCGATGATGTTTATGGGGGGACTTTTCGCTTGTTCAATAA AGTGCTTGTTAAAAACGGGCTTTCTTGCACCATTATAGACACTAGCGATCTATCCCAAATCAAAAAGGCTATCAAGCCCA ACACCAAAGCCCTTTATTTGGAAACCCCTAGTAACCCCTTGCTTAAAATCACGGATTTAGTGCAATGCGCTAGTGTTGCT AAAGATCATGGTTTGCTCACTATCGTGGATAACACTTTTGCCACCCCCTATTGCCAAAACCCTCTTCTTTTGGGGGCGGA TATTGTGGCACATAGCGGCACAAAATACTTAGGCGGTCATAGCGATGTGGTCGCCGGGCTTGTAACCACTAATAATGAAG CGCTAGCCCAAGAGATCGCTTTTTTCCAAAACGCTATCGGTGGGGTTTTAGGCCCTCAAGACAGCTGGCTGTTGCAAAGA GGGATTAAAACGCTAGGATTGCGCATGGAGGCCCACCAAAAAAATGCCCTTTACGTGGCTGAGTTTTTAGAAAAACACCC TAAAGTGGAAAAGGTTTATTACCCGGGTCTTCCCACTCACCCTAACCACGAACTGGCCAAAAAACAGATGCGTGGCTTTA GTGGGATGCTCTCTTTCACTCTCAAAAATGACAGCGAGGCGGTTACTTTTGTAGAAAGCCTTAAACTATTCATTTTGGGC GAGAGTTTGGGCGGAGTGGAAAGTTTGGTGGGGATTCCAGCGCTTATGACCCATGCGTGTATCCCTAAAGTGCAACGAGA AGCTGCCGGGATTAGAGATGGCCTGGTGCGCTTGTCTGTGGGGATTGAGCATGAACAGGATTTGTTAGAAGATTTAGAGC AAGCGTTCGCTAAAATAGGCTAA Protein sequence : MRMQTKLIHGGISEDAVTGAVSVPIYQTSTYRQDAIGRHKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHA VFSLLQSGDHVLLGDDVYGGTFRLFNKVLVKNGLSCTIIDTSDLSQIKKAIKPNTKALYLETPSNPLLKITDLVQCASVA KDHGLLTIVDNTFATPYCQNPLLLGADIVAHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQR GIKTLGLRMEAHQKNALYVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVTFVESLKLFILG ESLGGVESLVGIPALMTHACIPKVQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 3e-96 | 55 |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 2e-97 | 55 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 2e-73 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| K749_08860 | YP_008357709.1 | cystathionine beta-lyase | BAC0207 | Protein | 2e-61 | 43 |
