|
Name : glnA (K747_06620) Accession : YP_007979511.1 Strain : Helicobacter pylori UM032 Genome accession: NC_021215 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : - COG ID : - EC number : 6.3.1.2 Position : 939505 - 940950 bp Length : 1446 bp Strand : + Note : forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltra DNA sequence : ATGGTAGTAAGAACTCAAAATAGTGAAAGCAAAATCAAAGAATTTTTTGAATTTTGCAAAGAAAATGAAGTGGAATTTGT GGATTTTAGATTCAGCGATATTAAAGGCACTTGGAATCATATCGCTTATTCTTTTGGGGCTTTAACGCATGGCATGTTTA AAGAGGGGATTCCTTTTGATGCGAGTTCTTTTAAGGGATGGCAAGGCATTGAACACTCCGATATGATTTTAACCCCCGAT TTGGTGCGTTATTTCATTGACCCTTTTAGCGCGGATGTGAGCGTAGTCGTGTTTTGCGATGTGTATGATGTGTATAAAAA CCAGCCTTATGAGAAATGCCCTAGAAGTATCGCTAAAAAAGCCTTACAACATTTAAAAGATTCAGGTTTGGGCGATGTGG CTTATTTTGGTGCAGAGAATGAATTTTTCATCTTTGATTCCATTAAAATTAAAGACGCTTCCAATTCCCAATACTATGAA GTGGATAGCGAAGAGGGCGAATGGAATAGGGATAGAAGTTTTGAAAATGGCGTGAATTTTGGGCATAGACCGGGCAAGCA AGGGGGCTATATGCCTGTGCCACCAACGGATACGATGATGGATATTCGCACAGAAATTGTGAAAGTCTTAAACCAAGTGG GGTTAGAAACTTTTGTCGTCCATCATGAAGTCGCACAAGCGCAAGGCGAAGTGGGCGTAAAATTTGGGGATTTAGTGGAA GCCGCTGACAATGTCCAAAAACTCAAATATGTGGTTAAAATGGTCGCTCATTTAAACGGCAAAACCGCCACTTTCATGCC AAAACCTTTATATGGGGATAACGGGAGCGGGATGCACACCCATGTGAGTGTTTGGAAAAACAACGAAAACCTTTTTAGCG GCGAAACTTACAAGGGCTTGAGCGAGTTGGCGTTGCATTTTTTAGGGGGCGTGTTGCGTCACGCTAGAGGGTTAGCCGCT TTCACTAACGCTTCCACTAATTCTTACAAACGCCTGATTCCTGGCTATGAAGCCCCATCTATTTTAACCTATTCGGCTAA CAACAGGAGTGCGAGCGTGCGTATCCCTTATGGGATTTCTAAAAACAGCGCGAGGTTTGAATTCAGGTTTCCTGATAGCT CATCAAACCCCTACTTGGCTTTTGCAGCGATTTTAATGGCAGGCATGGATGGCGTTAAAAACAAGATTGATCCTGGCGAA GCGATGGACATTAACCTTTTCAAATTGACTTTAGATGAAATCAGAGAAAAGGGTATCAAGCAAATGCCCCACACCTTAAG GAGATCGCTAGAAGAAATGCTAGCCGATAAGCAGTATTTAAAAGAAGGTCAGGTCTTTAGCGAAGAATTTATTCAAGCCT ATCAGTCTCTTAAATTCAACGCTGAAGTGTTCCCATGGGAGAGCAAACCCCATCCTTTTGAATTTATCACCACTTATTCA TGCTAA Protein sequence : MVVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHGMFKEGIPFDASSFKGWQGIEHSDMILTPD LVRYFIDPFSADVSVVVFCDVYDVYKNQPYEKCPRSIAKKALQHLKDSGLGDVAYFGAENEFFIFDSIKIKDASNSQYYE VDSEEGEWNRDRSFENGVNFGHRPGKQGGYMPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGLSELALHFLGGVLRHARGLAA FTNASTNSYKRLIPGYEAPSILTYSANNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFAAILMAGMDGVKNKIDPGE AMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKEGQVFSEEFIQAYQSLKFNAEVFPWESKPHPFEFITTYS C |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA | YP_007979511.1 | glutamine synthetase | VFG1399 | Protein | 1e-89 | 45 |
