Gene Information

Name : K747_11655 (K747_11655)
Accession : YP_008357559.1
Strain : Helicobacter pylori UM032
Genome accession: NC_021215
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 911672 - 912052 bp
Length : 381 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGCTCTCTGCTAAAACACGCATTAGAACTCAGAGCAAACAAGAACTTGTGCAACCAAAAATAAAAGGATTGGTTATGGG
AAAAATTTTAGCTTCTTTGTTGGGTGGCGGAACAAATCTTTTTACAGGTTTATCTAGTGATTTGTTTTCTATGATATTAA
ATTTTTTGTTCTTTCTAATGTTAATGATGGGACTTAATGAAATATTAGAGAAGAAATTCAACTTACCCATGGATAATATC
AAGGATTTTATGATGGAAGTGCTGAAGAATGGATTTGGTAGTATGAAAAACATGGGATCTGCTTTGATTGGCAATGGTTT
TAGCAGTAGCAAATCAGACAAAACCGCTGATAAAATGGGTGTCCCCCAAGTAAAACTTTAG

Protein sequence :
MLSAKTRIRTQSKQELVQPKIKGLVMGKILASLLGGGTNLFTGLSSDLFSMILNFLFFLMLMMGLNEILEKKFNLPMDNI
KDFMMEVLKNGFGSMKNMGSALIGNGFSSSKSDKTADKMGVPQVKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0535 BAD13951.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-31 97
cag14 AAR03869.1 Cag14 Virulence cag PAI Protein 2e-25 85
HP0535 BAD14033.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-26 85
cagQ AAC44691.1 CagQ Virulence cag PAI Protein 7e-26 85
cag14 AAR03897.1 Cag14 Virulence cag PAI Protein 7e-26 85
cag14 AAR03958.1 Cag14 Virulence cag PAI Protein 7e-26 85
cagQ NP_223201.1 cag island protein Virulence cag PAI Protein 1e-25 85
HP0535 NP_207331.1 cag pathogenicity island protein (cag14) Virulence cag PAI Protein 4e-26 85
HP0535 BAD13868.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-25 85
cag14 AAR03927.1 Cag14 Virulence cag PAI Protein 2e-25 84
cagQ YP_003728730.1 cag pathogenicity island protein Q Virulence cag PAI Protein 5e-25 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K747_11655 YP_008357559.1 cag pathogenicity island protein VFG0294 Protein 1e-26 85