Gene Information

Name : K747_06800 (K747_06800)
Accession : YP_007979547.1
Strain : Helicobacter pylori UM032
Genome accession: NC_021215
Putative virulence/resistance : Virulence
Product : sodium:calcium antiporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 899889 - 900236 bp
Length : 348 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGAAATTTCTTACAAAAATCACTGACAGCTACAAGAAAGTTGTAGTAACTTTAGGGCTAGTGATAACAACCAATCCTTT
AATGGCGTTCAGCAGTCCTACAGCAGGCGTTACTGAGACTAAAACTGTGGTTGTTCAGATCATTTCTGTTCTAGCGATCG
TAGGTGGTTGCGCTCTAGGGGTCAAAGGCATAGCAGATATTTGGAAAATCTCTGATGACATCAAAAGAGGTCAGGCGACT
GTTTTTGCTTATGCGCAGCCCATAGCTATGTTAGCGGTGGCAGGCGGTATTATCTATTTGAGCACTAAGTTTGGCTTCAA
TATTGGCGAGGGTGGAGGAGCTAGCTAA

Protein sequence : 
MKFLTKITDSYKKVVVTLGLVITTNPLMAFSSPTAGVTETKTVVVQIISVLAIVGGCALGVKGIADIWKISDDIKRGQAT
VFAYAQPIAMLAVAGGIIYLSTKFGFNIGEGGGAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cag25 AAR03908.1 Cag25 Virulence cag PAI Protein 2e-39 94
HP0546 BAD13852.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-39 94
cagC YP_005774525.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-45 94
HP0546 BAD14071.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-45 94
cagC YP_005779047.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-45 94
HP0546 BAD13798.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-45 94
cagC YP_005777287.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-46 94
HP0546 BAD13907.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-45 94
HP0546 BAD14017.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-45 93
cag25 AAR03938.1 Cag25 Virulence cag PAI Protein 5e-39 92
HP0546 BAD13825.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-44 92
HP0546 NP_207342.1 cag pathogenicity island protein (cag25) Virulence cag PAI Protein 8e-39 92
HP0546 BAD13989.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-44 92
cagC AAC44704.1 CagC Virulence cag PAI Protein 1e-38 92
HP0546 BAD13934.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-44 91
cagC YP_003728718.1 cag pathogenicity island protein C Virulence cag PAI Protein 1e-34 91
cagC NP_223212.1 cag island protein Virulence cag PAI Protein 8e-39 91
cagC AGC69805.1 cag pathogenicity island protein C Virulence cag PAI Protein 3e-44 91
cagC YP_005775746.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-44 91
HP0546 BAD13879.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-44 91
cag25 AAR03969.1 Cag25 Virulence cag PAI Protein 3e-39 91
HP0546 BAD13962.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-44 90
HP0546 BAD14044.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-44 90
cag25 AAR03880.1 Cag25 Virulence cag PAI Protein 9e-44 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K747_06800 YP_007979547.1 sodium:calcium antiporter VFG0305 Protein 2e-39 92