|
Name : K747_10475 (K747_10475) Accession : YP_007978685.2 Strain : Helicobacter pylori UM032 Genome accession: NC_021215 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : - Position : 431545 - 433470 bp Length : 1926 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGCAATTAAGTAACGCTGACTTAGAACGATTAAAAAGCATGGCCAACACGCTGCGCTTTTTGTGCGCGGACATGATAGA TAAGGCTAATAGCGGGCATCCGGGCGTGTGCTTGGGATTAGCCGATGTGATGGTGGTTTTAAGCTTGCACTTAAACCTAA ACCCCACCAACCCTAAATGGCTCAACAGAGACAGACTGGTTTTTAGCGGAGGGCATGCGAGCGCGTTAGCGTATAGTTTG TTGCATTTGTGGGGCTTTGATTTGAGCCTAGAAGATTTAAAACATTTCAGGCAATTACACTCTAAAACCCCAGGACACCC CGAATTGCACCACACCGAAGGCATTGAGATCACAACCGGACCTTTGGGGCAAGGTTTTGCTAACGCTGTGGGCTTTAGCA TGGCGAGTCAATACGCTCAAAACCTTTTAGATAAAGAAGCCATTTCTCATAAAGTCTATTGCTTGTGTGGGGATGGGGAT TTGCAAGAAGGCATTAGTTATGAGAGCGCTTCTTTAGCCGGGCACCTCAACCTGAACAACCTCATTGTGATTTATGACAG CAACCAGATCAGCATTGAAGGCGCTATTAATATTAGTTTCAGCGAACAGGTCAAGATGCGGTTTTTGGCGCAAAATTGGG AAGTGATAGAATGCGATGGGCATGACTATCAAGCGATTCATAACGCTTTAGAAGAAGCCAAAAAATCCACCAAACCCACG CTTTTAATCGCTCATACGATTATTGGTAAGGGGGCTATTGGCTTAGAGGGGAGTGAAAAAACGCATGGCTCACCCTTAAA TAAAGAAGTGTTAAAACAATCCAAAGAAAACGCTCAAATCAACCCTGATGAAAGCTTTATCATTAGCCCAAAAAACAAAA TGCATTTTGAAGAAGTGAAAGTTAGGGGCGTTAGTTTAGAAGCTTTATGGGAAAAATCCTTAAGCCCCAAAATAAAAGAA AAGATCCATGCGTTAAAGGATTTTGATTTTAGCGCCATTAATTACCCCGTTTTCAAAAAAGGCGAATCTCTAGCCACGAG AGTGAGTAACGGCATGATTTTAAACGCTATCGCTAAAGAATGCGAGGGCTTTTTGGGGGGGAGCGCGGATTTAGCCCCAT CTAATAACACGCAGTTAAAACACTCTGGCGATTTCCCTTTGGGGCAAAACTTGCATTTTGGGATCAGAGAGCATGCCATG GGGGCTATCACTAACGCTTTAGCGGCGTATGGCTTGTTTGTGCCTTTTTGCGCGACCTTTTTTGTGTTTAGCGATTACTT GATGCCTAGCATTCGTTTGAGTGCTTTAATGAAACTAAAAGCCCTTTTTATTTTTACGCATGACAGCATTGGCGTGGGCG AAGACGGGGCGACGCACCAGCCTGTAGAGCAATTGAGTCATTTACGCGCTTTGCCCAATTTCTATGCTTTCAGACCCAGC GACGCTTTTGAAAATACCGCTTGCATGCAAGTGGCGTTAAGTTTGAATGCTCCTAGCGGGCTTATTTTATCGCGCCAGAA TTTACCCGTGCTTGATGAGGTTTCTAAAGAGCGGGTTTTAAAAGGCGCGTATGTTAAACACCACTCTAAAAACCCCGTTA TCACGCTAGTTGCGAGCGGGAGCGAAGTTTCTTTAGCCTTAGAGAGCGCTAAAATATTAGAGCGAGAAAATATCCCCACT CAAGTGGTGAGCGCACCATGCTTTGATTTATTGGTGGAACAAGATGAAAGCTATCTTAAAGAGCTTTTTAAGGGTAAAGT CTTAGTCATTGAAGCGAGCCGTGCGATAGAGTGGTATCGTTTTGCGGATAAAATCATTGGCATGGATTCTTTTGGGAGCT CAGCAAAGGGCGATAAACTCTTTGAAAAATTCGGCTTCAGCGTTGAAAACATCACCACTCAAGCTAAAAGGTTACTCCAC GCATGA Protein sequence : MQLSNADLERLKSMANTLRFLCADMIDKANSGHPGVCLGLADVMVVLSLHLNLNPTNPKWLNRDRLVFSGGHASALAYSL LHLWGFDLSLEDLKHFRQLHSKTPGHPELHHTEGIEITTGPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLCGDGD LQEGISYESASLAGHLNLNNLIVIYDSNQISIEGAINISFSEQVKMRFLAQNWEVIECDGHDYQAIHNALEEAKKSTKPT LLIAHTIIGKGAIGLEGSEKTHGSPLNKEVLKQSKENAQINPDESFIISPKNKMHFEEVKVRGVSLEALWEKSLSPKIKE KIHALKDFDFSAINYPVFKKGESLATRVSNGMILNAIAKECEGFLGGSADLAPSNNTQLKHSGDFPLGQNLHFGIREHAM GAITNALAAYGLFVPFCATFFVFSDYLMPSIRLSALMKLKALFIFTHDSIGVGEDGATHQPVEQLSHLRALPNFYAFRPS DAFENTACMQVALSLNAPSGLILSRQNLPVLDEVSKERVLKGAYVKHHSKNPVITLVASGSEVSLALESAKILERENIPT QVVSAPCFDLLVEQDESYLKELFKGKVLVIEASRAIEWYRFADKIIGMDSFGSSAKGDKLFEKFGFSVENITTQAKRLLH A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-97 | 42 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 7e-87 | 41 |
