Gene Information

Name : Tmari_0875 (Tmari_0875)
Accession : YP_007977225.1
Strain : Thermotoga maritima MSB8
Genome accession: NC_021214
Putative virulence/resistance : Virulence
Product : ClpB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 895099 - 897477 bp
Length : 2379 bp
Strand : +
Note : -

DNA sequence :
ATGAGAAACCTGAACGAAAAGATGAAGGATATTTTCGAGAGGAGCGTGGAGGATATCAAAGAAAGAAATCAGAACCTGCT
TAGACCAGAGCACATTCTCCTTCAGATCCTTTACGATGAAAACGAGGCCACGAAGGTGCTGAAAGATCTCAATGTAAACG
TGGAGGAAGTGATTACTGAGCTGGAGGACTACATCGATTCCCAGTACGGGATATACTACGGATTCTCCGATCAGGTCTAT
GTATCGAAAGAACTTTCTTACATCCTGGAGCTAGCGAGAAAGGAAGCCAGGCTTTTCAAGCAGAAGGATATAGGTCCTCT
TCACTTCCTTCTGGGACTGCTGAGAGATGGTTCCACACACGCTGCACGTGTCCTGAAGAAGTACGGTGTTGATTACGAAA
AAGTGCTTCAGACGGTTAAGGAGCACGAAGAAGAATACGCAGCTGAGCAGTCACCACTCACGGCTTTTGCAACCGATCTC
ACAAAATTGGCAAAAGAAGGAAAAGTGGGTCCCATCATAGGAAGAGACAGGGAAATCGAGCGCGTGATAGAGATTCTCAT
GAGAAAAACCAAGAACAACCCAATTCTCATCGGTGATCCGGGTGTTGGAAAAACCGCCATTGTGGAAGGTCTCGCACAGA
GAATCGTTGAAGGAAAAGTTCCTGATCCTCTAAAGGATGTGCGCATACTGATGGTAGATCTCGGAAGGATGATAGCGGGG
ACCAAATACAGGGGAGAATTCGAAGAAAGGTTGAAATCATTCCTCGATGAAGTGATGAAACAGAAAGAAAAAACGATTCT
CTTCATCGACGAGATACACACTCTGGTTGGTGCTGGCGCAGCCGAAGGAGCGATGGACGCTGCCAACATGTTGAAACCGG
CCCTTGCTCGCGGTGAAATACGCGTCATAGGTGCAACCACACTGGATGAGTACAGAAAACACATAGAAAAAGACAAAGCG
CTCGCGAGAAGATTCCAGCCGGTGATGGTGAGAGAACCGAGTGTGGAAGAGACCATAGAGATTTTGAAGGGGTTGAAGAA
AGTCTACGAGGAGCACCACAAAGTGAAGATAGAGGACGAAGCGATAGAGGCAGCTGCCAAGCTCTCAGCGAGATACATAA
CGGACAGATTCTTGCCAGACAAGGCGATTGACCTGCTGGATGAGGCGGCAGCGAGAGTGAGACTCAGCGCTACAAAACAG
GAAAAGGATGAAACGAAGCTTCGCGAGCTCGAGGAAAAAATAAAAGAGCTTGAAACGAAAATCGATGAGCTCACTATAAG
ATCTCAGTACAAAGAAGCGGCTGATCTCAAGAAAGAACTCTTCAAGCTCAAAAATGAGTATGAAGCTTTGAAGAGTGGGA
AACCGGTTGTCACAGCGGAAAAAATAGCAGAAGTGGTTGAATCCTGGTCTGGTGTTCCAGTTTCCAGAATCGTTGAATCT
GAAAAGGAAAAGCTTCTGAAGCTCGAAGAGATAATCCACCAGAGGCTCGTGGACCAGGAGGAAGCGGTCAAGGTAGTGGC
CGATGCCATCAGGAAGGCAAGGGCTGGAATAAAAGATCCTAACAGGCCAGTTGGTACCTTCCTCTTTCTTGGACCAACGG
GTGTTGGTAAGACTGAGCTCGCAAAGACACTCGCTGAAGTGCTCTTTGGAAGCGAAAACGCACTGATACGAATCGACATG
ACCGAATACATGGAAAAGCACGCTGTCTCCAAGCTGATAGGAGCACCTCCGGGATACGTTGGTTACGAGGAAGGTGGTCA
ACTGACCGAAGCCGTAAGAAGAAGACCGTACAGTGTTATATTGCTCGATGAGATTGAAAAAGCGCATCCGGATGTGTTCA
ACATACTGCTTCAGATAATGGACGATGGAAGACTCACAGACAGCAAAGGAAACGTTGTTGATTTCAAGAACACGATCATC
ATCATGACGAGTAACATAGCAAGCGATCTGATACTGAACTACGTTAAAGAAGGAAAGAGCTTTGATGAGATTGAAGAAAG
AGTCAGAGAAGAGCTGAAACACTACTTCAGACCCGAGTTCATAAACAGGATAGACCATGTCGTTGTCTTCAAACCGCTCA
CAAAAGAACACATGAAACAGATCGTGGAAATAATGATCAGAAGACTTGAAGCGCGGTTGAAGGACAAGAATATAAAACTC
ACGATCACTGAAGCGGCGAAAGAATACCTCGCAGAAAAAGGATACGATCCAACGTTCGGTGCAAGACCGCTGAGGCGGCT
GATAGAAAGGGAAATCGAAACACCACTCGCAAGAATGATCATAGCAGGTGAGGTGCAGGAAGGTCAGACGGTGAGAGTGG
ATTACAACGGTGAAAAACTGATCCTCGAAGTTGCCAGAGAACTCGAGAAGGTTCAGTAA

Protein sequence :
MRNLNEKMKDIFERSVEDIKERNQNLLRPEHILLQILYDENEATKVLKDLNVNVEEVITELEDYIDSQYGIYYGFSDQVY
VSKELSYILELARKEARLFKQKDIGPLHFLLGLLRDGSTHAARVLKKYGVDYEKVLQTVKEHEEEYAAEQSPLTAFATDL
TKLAKEGKVGPIIGRDREIERVIEILMRKTKNNPILIGDPGVGKTAIVEGLAQRIVEGKVPDPLKDVRILMVDLGRMIAG
TKYRGEFEERLKSFLDEVMKQKEKTILFIDEIHTLVGAGAAEGAMDAANMLKPALARGEIRVIGATTLDEYRKHIEKDKA
LARRFQPVMVREPSVEETIEILKGLKKVYEEHHKVKIEDEAIEAAAKLSARYITDRFLPDKAIDLLDEAAARVRLSATKQ
EKDETKLRELEEKIKELETKIDELTIRSQYKEAADLKKELFKLKNEYEALKSGKPVVTAEKIAEVVESWSGVPVSRIVES
EKEKLLKLEEIIHQRLVDQEEAVKVVADAIRKARAGIKDPNRPVGTFLFLGPTGVGKTELAKTLAEVLFGSENALIRIDM
TEYMEKHAVSKLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVFNILLQIMDDGRLTDSKGNVVDFKNTII
IMTSNIASDLILNYVKEGKSFDEIEERVREELKHYFRPEFINRIDHVVVFKPLTKEHMKQIVEIMIRRLEARLKDKNIKL
TITEAAKEYLAEKGYDPTFGARPLRRLIEREIETPLARMIIAGEVQEGQTVRVDYNGEKLILEVARELEKVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 6e-157 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmari_0875 YP_007977225.1 ClpB protein VFG0080 Protein 7e-138 50
Tmari_0875 YP_007977225.1 ClpB protein VFG0079 Protein 1e-167 49