Gene Information

Name : Tmari_1713 (Tmari_1713)
Accession : YP_007978062.1
Strain : Thermotoga maritima MSB8
Genome accession: NC_021214
Putative virulence/resistance : Virulence
Product : Lysyl-tRNA synthetase (class II)
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 1685059 - 1686567 bp
Length : 1509 bp
Strand : -
Note : Corresponds to TM1705

DNA sequence :
GTGCTGAAAGAGTTCAAAGAACAACGACTCAAAGAGATACAGGAACTTCGTTCTATGGGTATAGAGCCATATCCTTACAA
ATTCGAAAAGGAACTCACGGCCAGAGAAATAAGGGAAAAGTACGACTATCTTCAAGCTGGAGAAGTTCTTGAATCTGAAA
AGCTCTCTTTCGCAGGGAGAGTCATGTCGATACGTCACCACGGAAAGACGGCCTTCTTTCACATGAAAGATGACACGGGC
CGGATCCAGGCTTACATAAAAGCAGATTCTGTTGGGAAGGAAAAGATGGATCTCTTCAAAAGACACGTCAAAATAGGTGA
CTTTGTAGGAGTAAGAGGCTTTCCGTTCAAAAGCAAAACCGGAGAGTTGACCATTTACGTTCAAGAATACACGCTTCTGA
GCAAGGCTCTGCGGCCTCTGCCCGAGAAGTGGCACGGCATAAAAGATAAGGAAATCATATACAGGCAGAGGTACCTCGAA
CTCATCGTGAACGACGAGGCTATTGAGAGGTTCAAAAAGCGATTCAAGGCCGTCCGTGTGATACGGGAATTTCTCAACAG
CAGGGGATTCATCGAAGTGGAAACACCTATTCTTCATTACGTCACGGGTGGTGCGGAAGCGAGGCCTTTTGTGACCCATC
TCAACGTTTTTGATATCGATATGTATTTGAGAATCGCACCGGAGCTTTACCTGAAAAGGTTGATCGTCGGCGGTTTTGAA
AAGATATACGAGATAGGAAAGAACTTCAGAAACGAAGGAATATCTTACAAACACAGTCCCGAGTTCACCAGCATAGAGAT
CTACCAGGCTTACGCGGATTACAACGATATGATGGATCTCACTGAAGAGTTGATAGTGGAAGTTGTGAAAAGAACATGTG
GCACCTTGAAAATCTCCTACCAAGGCAAGGAGATAGACTTCACACCACCCTGGAAAAGAGTGAGAATGAGAGACTTTCTC
AAAGAAAAACTCGGGGTGGACATCCTCGAAGATCCCGATGAAGTGTTGTTGAAGAAGCTCGAAGAACATGGGGTAGAACT
GGAAATAAAGAACAGAGCACACCTCATAGACAAACTCAGAGATCTGGTGGAAGAAGAGCTGGTGAACCCCACCTTCATAA
TCGATCATCCTGTGGTGATTTCCCCTCTTGCCAAAAGACACCGAGAGGATCCTAGACTCACGGAAAGGTTCGAACTCATC
ATATTCGGAAGAGAGATCGCGAACGCGTTCAGTGAGCTGAACGATCCCGTTGATCAATACCAGAGATTTCTCGAACAGGC
GAAAATGAGAGAAGAGGGAGATGAAGAAGCACACATGATGGATCTCGATTTTGTGAGGGCCCTCGAGTATGGTATGCCTC
CCACGGGAGGACTGGGAATCGGTCTTGACAGGCTCTTCATGTTCATCACGGATTCCCCCACAATAAGGGATGTGATTCCC
TTCCCAATTGTGAAACCCAAAAAGTTCGAGGAAGAAGAGGCGGAATTCGAAGGAGGGTTTGAAGAATGA

Protein sequence :
MLKEFKEQRLKEIQELRSMGIEPYPYKFEKELTAREIREKYDYLQAGEVLESEKLSFAGRVMSIRHHGKTAFFHMKDDTG
RIQAYIKADSVGKEKMDLFKRHVKIGDFVGVRGFPFKSKTGELTIYVQEYTLLSKALRPLPEKWHGIKDKEIIYRQRYLE
LIVNDEAIERFKKRFKAVRVIREFLNSRGFIEVETPILHYVTGGAEARPFVTHLNVFDIDMYLRIAPELYLKRLIVGGFE
KIYEIGKNFRNEGISYKHSPEFTSIEIYQAYADYNDMMDLTEELIVEVVKRTCGTLKISYQGKEIDFTPPWKRVRMRDFL
KEKLGVDILEDPDEVLLKKLEEHGVELEIKNRAHLIDKLRDLVEEELVNPTFIIDHPVVISPLAKRHREDPRLTERFELI
IFGREIANAFSELNDPVDQYQRFLEQAKMREEGDEEAHMMDLDFVRALEYGMPPTGGLGIGLDRLFMFITDSPTIRDVIP
FPIVKPKKFEEEEAEFEGGFEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 6e-96 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmari_1713 YP_007978062.1 Lysyl-tRNA synthetase (class II) VFG1668 Protein 4e-96 45