Gene Information

Name : Tmari_1556 (Tmari_1556)
Accession : YP_007977905.1
Strain : Thermotoga maritima MSB8
Genome accession: NC_021214
Putative virulence/resistance : Virulence
Product : UDP-N-acetylglucosamine 4,6-dehydratase
Function : -
COG functional category : -
COG ID : -
EC number : 4.2.1.-
Position : 1541856 - 1543673 bp
Length : 1818 bp
Strand : +
Note : Corresponds to TM1548

DNA sequence :
ATGGTAAGAAAGGCGCTCCTTTTTGTAATCGACGTGGCTCTGACGTACTTTGCAGGTGTGGTGGCGCTCTTTTCGAGGTT
TGGTTTTGACTTTCAGGAAATGAGCCGTTATGACGAGTCCGTGATCGTATACACTGTTATCTCAGCCGTTGTCTACATTC
TGAACGGAAACTATTCCATCGTGTGGGAATACGCTAATGCCAGAGACTTTCTCATTCTCATAAGAGGAAGCGTTATCTCC
TATCTTTCCAACCTCGCGTTTTTTTATGTTTACAGGGGAATAGTTCTTCCCAGATCCGTGGGCTTTGCTGTCTTTCTTGG
ATCGATGGTTCTTCTCGTACTGAGCAGGATCACATGGCAGTGGATGATTGTGAACGGAAGAGGTAAAGTCCCAGGGGAAA
AGAGAATACTGATCATAGGAGCAGGAGATGCGGGAGTCTCTATTCTCGAAGAATTTGAGAAACACCCCCATTTAGGAAAA
ATAGTGGCCTTCGTGGACGATTCTCCCAGAAAGATCGGTCGAAAGGTGAGGGGAGTTCCGGTTTTTGGACCAATAGAGAA
AACAATGGAATTCGTGGAGAAAATGAACGTGGACGAAATCGTGATAGCTATACCTTCAGCTTCCAGAGCTGAGATGGAAC
GAATTCTCAAAAGCATCGATTTGAAAAAGGTCAGAGTAAAGACCCTCCCCAGTGTGAGAGAGCTGATAGAAGGACGTGTC
AGGATCTCCCATCTGAAGGAAATATCCATAGAAGATCTTCTGGGTCGCGAAGAAGTGAAGGTGGATTTTCATGAAATAGG
AAAATTCTTGAAAGGGAAGAAAATTCTTGTGACCGGAGCAGGAGGCAGTATCGGTTCTGAGCTTTGCAAGCAAATAGCCA
GGATGAATCCAGCGGAGATCTTTCTTCTGGGCCACGGAGAAACCAGTATATATCTCATAAACGAGTTTCTCACCGAACAC
TTTCCGGAGGTGAAGAAAAAAAGGATCATAGCGGATGTTGCCGACAGAAAGATAATGGAACACTGGTTGACCCAGCTGAG
GCCGGACGTGATCTTCCACGTGGCAGCGCACAAGCACGTTCCTTTGATGGAGGAAAATCCGCTTGAGGCTTTCAGAGTGA
ACGTTCTGGGAACGATGAATCTCGTGGAACTCTCCGAAAGGCTCGGTGTTAAGTATTTTGTTTTCATCTCGACAGACAAA
GCGGTGAATCCCACTTCTGTGATGGGCCTCACCAAGAGGATAGCGGAACTCTACATCCTTTCGAGAGAAAAAAACAGCAC
GAATTTCTCGATCGTGAGGTTTGGAAACGTTCTTGGAAGCAGGGGAAGCGTAGTGGAAAAATTTCGCCGTCAGATAGAAA
AAGGTGGGCCTGTAACGGTGACGGATCCACGAATGAAGCGCTACTTCATGTCCATACCTGAGGCCGTCTCCCTCATTCTC
CAGTCCCTTCTCTTCTCTTCCGGAAAGGATCTCTTCATTCTCGACATGGGAGAGCAGATACCCATCCTGAAGCTTGCGGA
AACCATGATCATGCTTTCTGGATACACCCCTTACCAGGACATAAAGATAGTTTTCACCGGAATCAGGCCGGGGGAGAAGA
TGTACGAAGAGTTGCTCTACCCTTACGAGGTGAAAGAGTTGACTCCACACTCGAAAATCTTCAGAGTGAAGACATCCGTT
CTTCCAGGGAAAGAGAGCGTAGAACAGGCAATCAACAGAATGAAAGAAGCCTTCGAAAACAGCGACGTAAAAGGACTTCT
CACCGAAATGAAAAAATTAGTCCCGGAGGCACAAATAAATGTGGGAAGCGATAATTAG

Protein sequence :
MVRKALLFVIDVALTYFAGVVALFSRFGFDFQEMSRYDESVIVYTVISAVVYILNGNYSIVWEYANARDFLILIRGSVIS
YLSNLAFFYVYRGIVLPRSVGFAVFLGSMVLLVLSRITWQWMIVNGRGKVPGEKRILIIGAGDAGVSILEEFEKHPHLGK
IVAFVDDSPRKIGRKVRGVPVFGPIEKTMEFVEKMNVDEIVIAIPSASRAEMERILKSIDLKKVRVKTLPSVRELIEGRV
RISHLKEISIEDLLGREEVKVDFHEIGKFLKGKKILVTGAGGSIGSELCKQIARMNPAEIFLLGHGETSIYLINEFLTEH
FPEVKKKRIIADVADRKIMEHWLTQLRPDVIFHVAAHKHVPLMEENPLEAFRVNVLGTMNLVELSERLGVKYFVFISTDK
AVNPTSVMGLTKRIAELYILSREKNSTNFSIVRFGNVLGSRGSVVEKFRRQIEKGGPVTVTDPRMKRYFMSIPEAVSLIL
QSLLFSSGKDLFILDMGEQIPILKLAETMIMLSGYTPYQDIKIVFTGIRPGEKMYEELLYPYEVKELTPHSKIFRVKTSV
LPGKESVEQAINRMKEAFENSDVKGLLTEMKKLVPEAQINVGSDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 6e-79 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmari_1556 YP_007977905.1 UDP-N-acetylglucosamine 4,6-dehydratase VFG1300 Protein 6e-80 42
Tmari_1556 YP_007977905.1 UDP-N-acetylglucosamine 4,6-dehydratase VFG0029 Protein 3e-68 41