Name : tetM (TL13_0601) Accession : YP_007974956.1 Strain : Streptococcus suis TL13 Genome accession: NC_021213 Putative virulence/resistance : Resistance Product : Tetracycline resistance protein TetM Function : - COG functional category : - COG ID : - EC number : - Position : 599799 - 601718 bp Length : 1920 bp Strand : + Note : - DNA sequence : ATGAAAATTATTAATATTGGAGTTTTAGCTCATGTTGATGCAGGAAAAACTACCTTAACAGAAAGCTTATTATATAACAG TGGAGCGATTACAGAATTAGGAAGCGTGGACAAAGGTACAACGAGGACGGATAATACGCTTTTAGAACGTCAGAGAGGAA TTACAATTCAGACAGGAATAACCTCTTTTCAGTGGGAAAATACGAAGGTGAACATCATAGACACGCCAGGACATATGGAT TTCTTAGCAGAAGTATATCGTTCATTATCAGTTTTAGATGGGGCAATTCTACTGATTTCTGCAAAAGATGGCGTACAAGC ACAAACTCGTATATTATTTCATGCACTTAGGAAAATGGGGATTCCCACAATCTTTTTTATCAATAAGATTGACCAAAATG GAATTGATTTATCAACGGTTTATCAGGATATTAAAGAGAAACTTTCTGCCGAAATTGTAATCAAACAGAAGGTAGAACTG TATCCTAATATGTGTGTGACGAACTTTACCGAATCTGAACAATGGGATACGGTAATAGAGGGAAACGATGACCTTTTAGA GAAATATATGTCCGGTAAATCATTAGAAGCATTGGAACTCGAACAAGAGGAAAGCATAAGATTTCAGAATTGTTCTCTGT TCCCTGTTTATCACGGAAGTGCAAAAAACAATATAGGGATTGATAACCTTATAGAAGTGATTACGAATAAATTTTATTCA TCAACACATCGAGGTCAGTCTGAACTTTGCGGAAAAGTTTTCAAAATTGAGTATTCGGAAAAAAGACAGCGTCTTGCATA TATACGTCTTTATAGTGGCGTACTGCATTTGCGAGATCCGGTTAGAATATCGGAAAAGGAAAAAATAAAAATTACAGAAA TGTATACTTCAATAAATGGTGAATTATGTAAAATCGATAAGGCTTATTCCGGGGAAATTGTTATTTTGCAGAATGAGTTT TTGAAGTTAAATAGTGTTCTTGGAGATACAAAGCTATTGCCACAGAGAGAGAGAATTGAAAATCCCCTCCCTCTGCTGCA AACGACTGTTGAACCGAGCAAACCTCAACAAAGGGAAATGTTACTTGATGCACTTTTAGAAATCTCCGACAGTGACCCGC TTCTGCGATATTATGTGGATTCTGCGACACATGAAATCATACTTTCTTTCTTAGGGAAAGTACAAATGGAAGTGACTTGT GCTCTGCTGCAAGAAAAGTATCATGTGGAGATAGAAATAAAAGAGCCTACAGTCATTTATATGGAAAGACCGTTAAAAAA AGCAGAGTATACCATTCACATCGAAGTTCCACCGAATCCTTTCTGGGCTTCTATTGGTCTATCTGTAGCACCGCTTCCAT TAGGGAGCGGAGTACAGTATGAGAGCTCGGTTTCTCTTGGATACTTAAATCAATCGTTTCAAAATGCAGTTATGGAGGGG ATACGCTATGGCTGTGAACAAGGATTGTATGGTTGGAATGTGACGGACTGTAAAATCTGTTTTAAGTATGGCTTATACTA TAGCCCTGTTAGTACCCCAGCAGATTTTAGGATGCTTGCTCCTATTGTATTGGAACAAGTCTTAAAAAAAGCTGGAACAG AATTGTTAGAGCCATATCTTAGTTTTAAAATTTATGCGCCACAGGAATATCTTTCACGAGCATACAACGATGCTCCTAAA TATTGTGCGAACATCGTAGACACTCAATTGAAAAATAATGAGGTCATTCTTAGTGGAGAAATCCCTGCTCGGTGTATTCA AGAATATCGTAGTGATTTAACTTTCTTTACAAATGGACGTAGTGTTTGTTTAACAGAGTTAAAAGGGTACCATGTTACTA CCGGTGAACCTGTTTGCCAGCCCCGTCGTCCAAATAGTCGTATAGATAAAGTACGATATATGTTCAATAAAATAACTTAG Protein sequence : MKIINIGVLAHVDAGKTTLTESLLYNSGAITELGSVDKGTTRTDNTLLERQRGITIQTGITSFQWENTKVNIIDTPGHMD FLAEVYRSLSVLDGAILLISAKDGVQAQTRILFHALRKMGIPTIFFINKIDQNGIDLSTVYQDIKEKLSAEIVIKQKVEL YPNMCVTNFTESEQWDTVIEGNDDLLEKYMSGKSLEALELEQEESIRFQNCSLFPVYHGSAKNNIGIDNLIEVITNKFYS STHRGQSELCGKVFKIEYSEKRQRLAYIRLYSGVLHLRDPVRISEKEKIKITEMYTSINGELCKIDKAYSGEIVILQNEF LKLNSVLGDTKLLPQRERIENPLPLLQTTVEPSKPQQREMLLDALLEISDSDPLLRYYVDSATHEIILSFLGKVQMEVTC ALLQEKYHVEIEIKEPTVIYMERPLKKAEYTIHIEVPPNPFWASIGLSVAPLPLGSGVQYESSVSLGYLNQSFQNAVMEG IRYGCEQGLYGWNVTDCKICFKYGLYYSPVSTPADFRMLAPIVLEQVLKKAGTELLEPYLSFKIYAPQEYLSRAYNDAPK YCANIVDTQLKNNEVILSGEIPARCIQEYRSDLTFFTNGRSVCLTELKGYHVTTGEPVCQPRRPNSRIDKVRYMFNKIT |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
SSU05_0922 | YP_001198287.1 | translation elongation factor (GTPases) | Not tested | 89K | Protein | 0.0 | 96 |
SSU98_0928 | YP_001200485.1 | translation elongation factor (GTPases) | Not tested | 89K | Protein | 0.0 | 96 |
tetO | AFJ97266.1 | truncated tetracycline resistant protein | Not tested | Not named | Protein | 3e-164 | 75 |
tet(W) | YP_005160006.1 | tetracycline resistance protein | Not tested | Not named | Protein | 0.0 | 69 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
tetM | YP_007974956.1 | Tetracycline resistance protein TetM | X04388.gene.p01 | Protein | 0.0 | 98 |
tetM | YP_007974956.1 | Tetracycline resistance protein TetM | M85225.gene.p01 | Protein | 0.0 | 97 |
tetM | YP_007974956.1 | Tetracycline resistance protein TetM | NC_002758.1120355.p0 | Protein | 0.0 | 95 |
tetM | YP_007974956.1 | Tetracycline resistance protein TetM | NC_009782.5559075.p0 | Protein | 0.0 | 95 |
tetM | YP_007974956.1 | Tetracycline resistance protein TetM | AM180355.1.gene636.p | Protein | 0.0 | 93 |
tetM | YP_007974956.1 | Tetracycline resistance protein TetM | L09756.gene.p01 | Protein | 0.0 | 79 |
tetM | YP_007974956.1 | Tetracycline resistance protein TetM | AJ295238.gene.p01 | Protein | 0.0 | 72 |
tetM | YP_007974956.1 | Tetracycline resistance protein TetM | AY485126.gene.p01 | Protein | 0.0 | 70 |
tetM | YP_007974956.1 | Tetracycline resistance protein TetM | AJ222769.gene.p01 | Protein | 0.0 | 69 |
tetM | YP_007974956.1 | Tetracycline resistance protein TetM | DQ294299.gene.p01 | Protein | 0.0 | 69 |
tetM | YP_007974956.1 | Tetracycline resistance protein TetM | FN594949.1.gene24.p0 | Protein | 0.0 | 67 |
tetM | YP_007974956.1 | Tetracycline resistance protein TetM | L42544.gene.p01 | Protein | 1e-126 | 45 |
tetM | YP_007974956.1 | Tetracycline resistance protein TetM | AJ514254.gene.p01 | Protein | 5e-122 | 43 |
tetM | YP_007974956.1 | Tetracycline resistance protein TetM | Z21523.gene.p01 | Protein | 3e-109 | 41 |