Gene Information

Name : TL13_0538 (TL13_0538)
Accession : YP_007974894.1
Strain : Streptococcus suis TL13
Genome accession: NC_021213
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 534433 - 535128 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGAACCAGCTTATTAGACTAACAAGTATCAATAAATCCTACAAAAATGGTGATCAAGAACTCCGAGTTTTAAAGAA
TATTGACTTAGAGGTGGAAGAGGGAGAATTTCTTGCCATTATGGGGCCCTCTGGTTCAGGGAAATCAACCTTGATGAACA
TTATTGGGCTTTTGGATCGTTCCAGTTCAGGAAACTATTGGCTGGAAGGTGAAGAAGTCAGTCAACTTTCTGAGAAAAAA
TTAGCTCAGGTTCGGAATGACCAAATCGGTTTCGTCTTTCAACAATTTTTCCTCTTATCGAAACTTAACGCCCTTCAAAA
TGTAGAATTACCCTTGATTTATGCTGGAGTTCCATCAAGCAAACGTAAGGAACTAGCGAAACAATATCTTGAAAAAGTTG
AGTTGGCAGAGCGGATGACGCATTTACCATCGGAATTGTCTGGTGGTCAAAAACAACGGGTAGCTATTGCGCGTGCACTA
GTCAATACTCCGGCTATTATTTTAGCGGACGAGCCAACAGGAGCCTTAGATACTAAGACAGGTGAGCAAATCATGGAACT
CTTGACTGAGTTAAATAATGAAGGAAAGACTATTATCATGGTTACGCACGAGCCTGAGATTGCTGCCTACGCAAAACGAA
AAATCGTTCTACGTGATGGAGTGATCACTGAAGATAGTCGAAGGGAGGGACTTTAG

Protein sequence : 
MKNQLIRLTSINKSYKNGDQELRVLKNIDLEVEEGEFLAIMGPSGSGKSTLMNIIGLLDRSSSGNYWLEGEEVSQLSEKK
LAQVRNDQIGFVFQQFFLLSKLNALQNVELPLIYAGVPSSKRKELAKQYLEKVELAERMTHLPSELSGGQKQRVAIARAL
VNTPAIILADEPTGALDTKTGEQIMELLTELNNEGKTIIMVTHEPEIAAYAKRKIVLRDGVITEDSRREGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-39 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-39 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-39 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TL13_0538 YP_007974894.1 ABC transporter NC_012469.1.7686878. Protein 8e-87 80
TL13_0538 YP_007974894.1 ABC transporter NC_008702.1.4606598. Protein 2e-50 49
TL13_0538 YP_007974894.1 ABC transporter CP001581.1.gene798.p Protein 2e-40 44
TL13_0538 YP_007974894.1 ABC transporter CP001581.1.gene598.p Protein 3e-35 41