Gene Information

Name : aspC (TL13_0385)
Accession : YP_007974754.1
Strain : Streptococcus suis TL13
Genome accession: NC_021213
Putative virulence/resistance : Unknown
Product : Aspartate aminotransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 380447 - 381661 bp
Length : 1215 bp
Strand : +
Note : -

DNA sequence :
ATGAAGCAATTTAACAAGTCAACAAAATTGGATGATGTAGCATATGATATTCGTGGGCCTGTTTTGGAAGAGGCCATGCG
CATGCGTGCCAATGGAGAGCAGATTTTACGTTTGAATACGGGGAATCCTGCAGAATTTGGTTTTACTGCTCCAGATGAAG
TTATTCGTGACTTGATTCATAACGCCCGTAAATCAGAGGGATATTCGAACAGTAAGGGAATTTTTTCTGCACGTAAGGCT
ATCATGCAGTATTGTCAGCTAAAGAAATTTCCAAATGTTGATATTGAAGATATTTATCTTGGAAACGGCGTGAGTGAGCT
GATTGTTATGTCTATGCAAGGTTTGCTAGATAATGGTGATGAGGTATTGGTGCCAATGCCAGACTATCCTCTCTGGACTG
CCGCAGTTAGTTTGGCTGGTGGTAAAGCTGTTCACTATGTTTGTGATGAAGCAGCTGAATGGTATCCAGATTTGGCAGAT
ATGGAGTCCAAGGTGACTTCTCGAACCAAGGCAATTGTCCTTATCAATCCAAATAATCCAACTGGTGCTCTCTATCCGAA
AGAAATTTTAGAAGGAATCATTGATATTGCTCGTAGACATGAATTGATCATTTTCTCTGATGAGATTTATGATCGTATGG
TCTTTGACGGAGCTGTTCATATCCCTATTGCGACCCTGGCTCCAGATTTATTTGTTGTGACGATGAATGGACTGTCTAAA
TCGCATCGTATTTGTGGTTTCCGAGTAGGTTGGATGGTCTTATCTGGTCCGAAAAAGCATGTAAAAGGTTACATTGAAGG
CTTGAATATGTTGTCCAATATGCGTTTGTGTTCAAACGTTTTGGCTCAACAGGTTGTTCAAACTTCTTTGGGAGGTTACC
AATCGGTTGATGAACTCTTGATGCCTGGCGGACGCTTATATGAACAAAGGGAGTTCATTACCAAGGCGATTAATGATATT
CCGGGACTTTCTGCTGTAAAACCTAAGGCTGGTCTGTATGTCTTCCCCAAAATTGATCGTGAGATGTACCGAGTTGAGGA
TGATGAACAATTTGTATTGGATTTCCTCAAGCAAGAAAAAGTACTTTTGGTCCATGGTCGAGGTTTTAACTGGAAGGATC
CAGATCATTTCCGTATTGTGTATTTACCACGTGTGGATGAGTTGGCAGAAATTCAAGAAAAAATGTCACGATTCTTGCGG
CAATATCGTAGATAA

Protein sequence :
MKQFNKSTKLDDVAYDIRGPVLEEAMRMRANGEQILRLNTGNPAEFGFTAPDEVIRDLIHNARKSEGYSNSKGIFSARKA
IMQYCQLKKFPNVDIEDIYLGNGVSELIVMSMQGLLDNGDEVLVPMPDYPLWTAAVSLAGGKAVHYVCDEAAEWYPDLAD
MESKVTSRTKAIVLINPNNPTGALYPKEILEGIIDIARRHELIIFSDEIYDRMVFDGAVHIPIATLAPDLFVVTMNGLSK
SHRICGFRVGWMVLSGPKKHVKGYIEGLNMLSNMRLCSNVLAQQVVQTSLGGYQSVDELLMPGGRLYEQREFITKAINDI
PGLSAVKPKAGLYVFPKIDREMYRVEDDEQFVLDFLKQEKVLLVHGRGFNWKDPDHFRIVYLPRVDELAEIQEKMSRFLR
QYRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-118 57
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-118 57
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 1e-118 57
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-118 57