Gene Information

Name : TL13_1397 (TL13_1397)
Accession : YP_007975747.1
Strain : Streptococcus suis TL13
Genome accession: NC_021213
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1415177 - 1415935 bp
Length : 759 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAGTTTTAGATGTTCAACACGTTCAAAAGATATACAGTTCTCTCTTTAAGGCGGGGCAGGTTGAGGCTTTGAAGGA
TATTCATTTTATAGTGGAAAAGGGTGAGTATGTCGCTATTATGGGTGAGTCTGGTTCTGGAAAATCCACCTTGCTCAATA
TTTTGGCAACCCTTGATAAGCCAACGCAGGGCAAGGTCTTGCTTAACGGATTGGATACCCAGTCTATCAAGAGCAAGGAA
GCGGCAGCCTTTCGTCGAGAGAAATTGGGCTTTGTCTTCCAAGATTTCAATCTCTTGGATACCCTCTCTGTCAAGGACAA
TGTGCTCTTACCTCTGGTTTTATCCCGCTATCCGATTGATGAGATGAACAAGCGACTCGTTCATACGCTTAATAGCCTGG
GAATTGCGACCTTGCAAGACAAGATGCCCTACGAGATTTCGGGTGGTCAGCAGCAGCGAGTTGCGGTGGCGCGTGCCATC
ATTACCCAGCCAGAAATCCTCTTAGCGGATGAGCCGACTGGGGCCCTCGACTCTAAATCAACGGCAACTCTTCTAGATAT
TTTTGAAAAAATCAATCAAGAAGGGCAAACCATTCTGATGGTAACCCACTCGACAGTAGCAGCTAGTCGTGCCAAACGGG
TCCTCTTCATCAAGGATGGCATTCTCTACAATCAAATCTACCGAGGTGAGAGAACCAGTCAGGAAATGTATCAGCTGATT
TCAGATACCTTGACACTTATGGCGAATCGAGGTGAGTAG

Protein sequence : 
MSVLDVQHVQKIYSSLFKAGQVEALKDIHFIVEKGEYVAIMGESGSGKSTLLNILATLDKPTQGKVLLNGLDTQSIKSKE
AAAFRREKLGFVFQDFNLLDTLSVKDNVLLPLVLSRYPIDEMNKRLVHTLNSLGIATLQDKMPYEISGGQQQRVAVARAI
ITQPEILLADEPTGALDSKSTATLLDIFEKINQEGQTILMVTHSTVAASRAKRVLFIKDGILYNQIYRGERTSQEMYQLI
SDTLTLMANRGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TL13_1397 YP_007975747.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-42 46
TL13_1397 YP_007975747.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-40 43
TL13_1397 YP_007975747.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-36 43
TL13_1397 YP_007975747.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-36 41