Gene Information

Name : csrR (GBS222_1355)
Accession : YP_007969041.1
Strain : Streptococcus agalactiae 2-22
Genome accession: NC_021195
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1407688 - 1408377 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence :
ATGGGTAAAAAGATCTTAATAATCGAAGATGAGAAAAATTTAGCTCGCTTCGTCTCGTTAGAACTACTACATGAAGGATA
TGATGTTGTTGTTGAAACAAACGGTCGTGAAGGATTGGACACAGCATTAGAAAAAGATTTTGATTTGATTCTACTGGATT
TAATGCTTCCAGAGATGGATGGTTTCGAAATTACACGTCGCCTGCAGGCTGAAAAAACAACCTATATCATGATGATGACA
GCACGTGATTCTGTTATGGATATTGTAGCTGGTCTTGATCGTGGAGCAGATGATTATATTGTTAAGCCGTTTGCAATCGA
AGAATTATTAGCACGTGTTAGAGCGATTTTCCGACGCCAAGAAATTGAAACGAAGACAAAAGAAAAAGGTGATAGCGGTA
GTTTCCGTGATTTATCATTAAATACTCATAATCGTTCAGCGATGCGTGGTGATGAGGAAATTTCGCTAACAAAACGTGAA
TTTGATTTGTTGAATGTCTTGATGACAAATATGAATCGTGTTATGACACGAGAAGAGTTGCTAGAACATATTTGGAAATA
CGATGTGGCAGCAGAGACAAACGTTGTTGATGTTTATATCCGTTACCTAAGAGGTAAAATTGATATCCCAGGTCGTGAAT
CATATATTCAAACTGTTCGCGGAATGGGCTATGTGATTCGTGAAAAATAA

Protein sequence :
MGKKILIIEDEKNLARFVSLELLHEGYDVVVETNGREGLDTALEKDFDLILLDLMLPEMDGFEITRRLQAEKTTYIMMMT
ARDSVMDIVAGLDRGADDYIVKPFAIEELLARVRAIFRRQEIETKTKEKGDSGSFRDLSLNTHNRSAMRGDEEISLTKRE
FDLLNVLMTNMNRVMTREELLEHIWKYDVAAETNVVDVYIRYLRGKIDIPGRESYIQTVRGMGYVIREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-36 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
csrR YP_007969041.1 two-component response regulator HE999704.1.gene1528. Protein 1e-56 59
csrR YP_007969041.1 two-component response regulator AE015929.1.gene1106. Protein 2e-48 53
csrR YP_007969041.1 two-component response regulator NC_010079.5776364.p0 Protein 4e-51 52
csrR YP_007969041.1 two-component response regulator NC_002952.2859858.p0 Protein 4e-51 52
csrR YP_007969041.1 two-component response regulator NC_007622.3794948.p0 Protein 4e-51 52
csrR YP_007969041.1 two-component response regulator NC_003923.1003417.p0 Protein 4e-51 52
csrR YP_007969041.1 two-component response regulator NC_013450.8614146.p0 Protein 4e-51 52
csrR YP_007969041.1 two-component response regulator NC_002951.3238224.p0 Protein 4e-51 52
csrR YP_007969041.1 two-component response regulator NC_007793.3914065.p0 Protein 4e-51 52
csrR YP_007969041.1 two-component response regulator NC_002758.1121390.p0 Protein 4e-51 52
csrR YP_007969041.1 two-component response regulator NC_012469.1.7685629. Protein 1e-39 43
csrR YP_007969041.1 two-component response regulator AE016830.1.gene1681. Protein 6e-41 42
csrR YP_007969041.1 two-component response regulator NC_012469.1.7686381. Protein 6e-37 41
csrR YP_007969041.1 two-component response regulator BAC0125 Protein 1e-36 41
csrR YP_007969041.1 two-component response regulator BAC0197 Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
csrR YP_007969041.1 two-component response regulator VFG1390 Protein 2e-41 43
csrR YP_007969041.1 two-component response regulator VFG0596 Protein 3e-36 42
csrR YP_007969041.1 two-component response regulator VFG1389 Protein 4e-37 42